RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 OR13C8Q8NGS7 320 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 TCTEX1D2Q8WW35 142 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 FCAMRQ8WWV6 532 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 DEDD2Q8WXF8 326 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 USMG5Q96IX5 58 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 CLCC1Q96S66 551 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 ATP6V0BQ99437 205 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 SPIN2AQ99865 258 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 SPIN2BQ9BPZ2 258 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 RTBDNQ9BSG5 229 aaPredicted RBP4.38□□□□□ -1.71
CUX1-208ENST00000485792 MCRIP2Q9BUT9 160 aaKnown RBP4.38□□□□□ -1.71
CUX1-208ENST00000485792 NDUFA4L2Q9NRX3 87 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 TMEM14BQ9NUH8 114 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 AURKAIP1Q9NWT8 199 aaPredicted RBP4.38□□□□□ -1.71
CUX1-208ENST00000485792 SIGLEC8Q9NYZ4 499 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 GPR132Q9UNW8 380 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 ZNF257Q9Y2Q1 563 aa4.38□□□□□ -1.71
CUX1-208ENST00000485792 DNAH1Q9P2D7 4330 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 IGLV11-55A0A075B6I3 123 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 IGHV4OR15-8A0A075B7B6 117 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 A0A087WW49 117 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 A0A0G2JLM5 398 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 TEX50A0A1B0GTY4 177 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 WI2-2373I1.2A0A1W2PRP0 233 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 FAM223BA6NKX1 122 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 FAM25AB3EWG3 89 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 FAM25CB3EWG5 89 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 FAM25GB3EWG6 89 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 K7EIL1 84 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 M0QYG6 137 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 MPPED1O15442 326 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 CREBL2O60519 120 aaPredicted RBP4.37□□□□□ -1.71
CUX1-208ENST00000485792 B3GALNT1O75752 331 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 S1PR2O95136 353 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 CDS2O95674 445 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 PRH1P02810 166 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 HSPB1P04792 205 aaKnown RBP4.37□□□□□ -1.71
CUX1-208ENST00000485792 RLN1P04808 185 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 OR8U8P0C7N1 319 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 AREGP15514 252 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 RPA2P15927 270 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 HLA-GP17693 338 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 UCP1P25874 307 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 HOXD3P31249 432 aaPredicted RBP4.37□□□□□ -1.71
CUX1-208ENST00000485792 INSL3P51460 131 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 TAS2R19P59542 299 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 FXYD4P59646 89 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 PLGLAQ15195 96 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 TNXAQ16473 311 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 ECSCRQ19T08 205 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 IZUMO4Q1ZYL8 232 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 THOC7Q6I9Y2 204 aaKnown RBP4.37□□□□□ -1.71
CUX1-208ENST00000485792 STEAP1BQ6NZ63 245 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 TMEM65Q6PI78 240 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 TMEM17Q86X19 198 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 FAM223AQ8IWN6 122 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 CMTM1Q8IZ96 169 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 GDPD1Q8N9F7 314 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 NECAP1Q8NC96 275 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 OR5T1Q8NG75 326 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 OR1N2Q8NGR9 330 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 LHFPL5Q8TAF8 219 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 GLYATL2Q8WU03 294 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 DLX4Q92988 240 aaPredicted RBP4.37□□□□□ -1.71
CUX1-208ENST00000485792 TMEM230Q96A57 120 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 DIRAS2Q96HU8 199 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 FYTTD1Q96QD9 318 aaKnown RBP4.37□□□□□ -1.71
CUX1-208ENST00000485792 C5orf66Q9H5L9 145 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 AKIP1Q9NQ31 210 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 RSL24D1Q9UHA3 163 aaKnown RBP4.37□□□□□ -1.71
CUX1-208ENST00000485792 LSM4Q9Y4Z0 139 aaKnown RBP4.37□□□□□ -1.71
CUX1-208ENST00000485792 LYSTQ99698 3801 aa4.37□□□□□ -1.71
CUX1-208ENST00000485792 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.36□□□□□ -1.71
CUX1-208ENST00000485792 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 HMX3A6NHT5 357 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 LINC01619G3V211 115 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 H0Y980 276 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 RGS5O15539 181 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 CNIH1O95406 144 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 RAB3DO95716 219 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 IGKV1-5P01602 117 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 TRGV3P03979 118 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 CTSDP07339 412 aaPredicted RBP4.36□□□□□ -1.71
CUX1-208ENST00000485792 PSMB6P28072 239 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 FCGR2BP31994 310 aaPredicted RBP4.36□□□□□ -1.71
CUX1-208ENST00000485792 LPAR6P43657 344 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 RPL27AP46776 148 aaKnown RBP4.36□□□□□ -1.71
CUX1-208ENST00000485792 SLURP1P55000 103 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 HERV-K104P61576 105 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 TSPAN5P62079 268 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 WT1-ASQ06250 92 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 KLF9Q13886 244 aaPredicted RBP4.36□□□□□ -1.71
CUX1-208ENST00000485792 MEF2DQ14814 521 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 BSXQ3C1V8 233 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 RNASE10Q5GAN6 216 aaKnown RBP4.36□□□□□ -1.71
CUX1-208ENST00000485792 FAM209BQ5JX69 171 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 LINC00299Q6ZSB3 139 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 HSD17B13Q7Z5P4 300 aaPredicted RBP4.36□□□□□ -1.71
CUX1-208ENST00000485792 TBC1D26Q86UD7 250 aa4.36□□□□□ -1.71
CUX1-208ENST00000485792 ZNF429Q86V71 674 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms