RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 OR4D10Q8NGI6 311 aa11.98□□□□□ -0.49
HDAC6-218ENST00000470942 ZNF486Q96H40 463 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-218ENST00000470942 TSC22D3Q99576 134 aa11.98□□□□□ -0.49
HDAC6-218ENST00000470942 RABL2AQ9UBK7 228 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-218ENST00000470942 RABL2BQ9UNT1 228 aa11.98□□□□□ -0.49
HDAC6-218ENST00000470942 SMAD5-AS1Q9Y6J3 95 aa11.98□□□□□ -0.49
HDAC6-218ENST00000470942 IGLV11-55A0A075B6I3 123 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 CCDC160A6NGH7 325 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 CYB5BO43169 146 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 GGCTO75223 188 aaKnown RBP11.97□□□□□ -0.49
HDAC6-218ENST00000470942 OR2C1O95371 312 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 HLA-AP01891 365 aaKnown RBP11.97□□□□□ -0.49
HDAC6-218ENST00000470942 SERPINE2P07093 398 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 CSN3P07498 182 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 ARL3P36405 182 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 MECP2P51608 486 aaKnown RBP11.97□□□□□ -0.49
HDAC6-218ENST00000470942 PIGPP57054 158 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 RND3P61587 244 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 KLK9Q2XQG4 91 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 C11orf87Q6NUJ2 197 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 IL34Q6ZMJ4 242 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 H2BFWTQ7Z2G1 175 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 CADM3Q8N126 398 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 OR4A16Q8NH70 328 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 TERB2Q8NHR7 220 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 ZFAND1Q8TCF1 268 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 SMIM4Q8WVI0 70 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 NDUFA4L2Q9NRX3 87 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 FKBP11Q9NYL4 201 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 THYN1Q9P016 225 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 KLK9Q9UKQ9 250 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 PRNDQ9UKY0 176 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 DNAH9Q9NYC9 4486 aa11.97□□□□□ -0.49
HDAC6-218ENST00000470942 IGKV1-39P01597 117 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 IGKV1D-39P04432 117 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 PTBP1P26599 531 aaKnown RBP eCLIP11.96□□□□□ -0.491e-16■■■■■ 43.3
HDAC6-218ENST00000470942 WT1-ASQ06250 92 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 MEF2DQ14814 521 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 SLC25A24Q6NUK1 477 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 FAAP20Q6NZ36 180 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 HSD17B13Q7Z5P4 300 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-218ENST00000470942 MCFD2Q8NI22 146 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 LSM10Q969L4 123 aaKnown RBP11.96□□□□□ -0.49
HDAC6-218ENST00000470942 MRGPRFQ96AM1 343 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 SEC22AQ96IW7 307 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 CXorf58Q96LI9 332 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 CCDC140Q96MF4 163 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 ASCL2Q99929 193 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 SLIRPQ9GZT3 109 aaKnown RBP11.96□□□□□ -0.49
HDAC6-218ENST00000470942 COPZ2Q9P299 210 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 DMRT1Q9Y5R6 373 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 CEPT1Q9Y6K0 416 aa11.96□□□□□ -0.49
HDAC6-218ENST00000470942 TRBV7-1A0A0A6YYK4 115 aa11.95□□□□□ -0.5
HDAC6-218ENST00000470942 MFSD2BA6NFX1 497 aa11.95□□□□□ -0.5
HDAC6-218ENST00000470942 C15orf61A6NNL5 157 aa11.95□□□□□ -0.5
HDAC6-218ENST00000470942 DISC1C4P0D8 188 aa11.95□□□□□ -0.5
HDAC6-218ENST00000470942 H0Y980 276 aa11.95□□□□□ -0.5
HDAC6-218ENST00000470942 CTDSPLO15194 276 aa11.95□□□□□ -0.5
HDAC6-218ENST00000470942 GDPD1Q8N9F7 314 aa11.95□□□□□ -0.5
HDAC6-218ENST00000470942 CCDC71LQ8N9Z2 235 aa11.95□□□□□ -0.5
HDAC6-218ENST00000470942 OR13C8Q8NGS7 320 aa11.95□□□□□ -0.5
HDAC6-218ENST00000470942 MARCH1Q8TCQ1 289 aa11.95□□□□□ -0.5
HDAC6-218ENST00000470942 TMEM56Q96MV1 263 aa11.95□□□□□ -0.5
HDAC6-218ENST00000470942 RSL24D1Q9UHA3 163 aaKnown RBP11.95□□□□□ -0.5
HDAC6-218ENST00000470942 C3orf85A0A1B0GTC6 90 aa11.94□□□□□ -0.5
HDAC6-218ENST00000470942 FABP12A6NFH5 140 aa11.94□□□□□ -0.5
HDAC6-218ENST00000470942 DBX1A6NMT0 343 aa11.94□□□□□ -0.5
HDAC6-218ENST00000470942 CLEC3BP05452 202 aa11.94□□□□□ -0.5
HDAC6-218ENST00000470942 NHLRC4P0CG21 123 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-218ENST00000470942 AKAIN1P0CW23 69 aa11.94□□□□□ -0.5
HDAC6-218ENST00000470942 TNFSF8P32971 234 aa11.94□□□□□ -0.5
HDAC6-218ENST00000470942 OR5B3Q8NH48 314 aa11.94□□□□□ -0.5
HDAC6-218ENST00000470942 TP53RKQ96S44 253 aa11.94□□□□□ -0.5
HDAC6-218ENST00000470942 ZC4H2Q9NQZ6 224 aa11.94□□□□□ -0.5
HDAC6-218ENST00000470942 TMEM14BQ9NUH8 114 aa11.94□□□□□ -0.5
HDAC6-218ENST00000470942 SIGLEC8Q9NYZ4 499 aa11.94□□□□□ -0.5
HDAC6-218ENST00000470942 ZNF320A2RRD8 509 aa11.93□□□□□ -0.5
HDAC6-218ENST00000470942 CTSDP07339 412 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-218ENST00000470942 TRIM16LQ309B1 348 aa11.93□□□□□ -0.5
HDAC6-218ENST00000470942 FAM106AQ4KMX7 169 aa11.93□□□□□ -0.5
HDAC6-218ENST00000470942 LCN12Q6JVE5 192 aa11.93□□□□□ -0.5
HDAC6-218ENST00000470942 GPHB5Q86YW7 130 aa11.93□□□□□ -0.5
HDAC6-218ENST00000470942 OR4C16Q8NGL9 310 aa11.93□□□□□ -0.5
HDAC6-218ENST00000470942 ZNF502Q8TBZ5 544 aa11.93□□□□□ -0.5
HDAC6-218ENST00000470942 DYNLRB2Q8TF09 96 aa11.93□□□□□ -0.5
HDAC6-218ENST00000470942 NXF2Q9GZY0 626 aaKnown RBP11.93□□□□□ -0.5
HDAC6-218ENST00000470942 C14orf166Q9Y224 244 aaKnown RBP11.93□□□□□ -0.5
HDAC6-218ENST00000470942 F11RQ9Y624 299 aaKnown RBP11.93□□□□□ -0.5
HDAC6-218ENST00000470942 IGHV3-21A0A0B4J1V1 117 aa11.92□□□□□ -0.5
HDAC6-218ENST00000470942 GSTZ1O43708 216 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-218ENST00000470942 ATG12O94817 140 aa11.92□□□□□ -0.5
HDAC6-218ENST00000470942 GPR183P32249 361 aa11.92□□□□□ -0.5
HDAC6-218ENST00000470942 AKR1C2P52895 323 aa11.92□□□□□ -0.5
HDAC6-218ENST00000470942 IZUMO4Q1ZYL8 232 aa11.92□□□□□ -0.5
HDAC6-218ENST00000470942 SP6Q3SY56 376 aa11.92□□□□□ -0.5
HDAC6-218ENST00000470942 Q8N402 240 aa11.92□□□□□ -0.5
HDAC6-218ENST00000470942 VN1R17PQ8TDU5 208 aa11.92□□□□□ -0.5
HDAC6-218ENST00000470942 IZUMO1RA6ND01 250 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 C2orf70A6NJV1 201 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 LGALS9O00182 355 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms