RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	IFNA6	P05013	189 aa		13.35	□□□□□ -0.27
MRPL28-203	ENST00000429738	CLEC3B	P05452	202 aa		13.35	□□□□□ -0.27
MRPL28-203	ENST00000429738	CBLN1	P23435	193 aa		13.35	□□□□□ -0.27
MRPL28-203	ENST00000429738	HLA-DMA	P28067	261 aa		13.35	□□□□□ -0.27
MRPL28-203	ENST00000429738	CMTM1	Q8IZ96	169 aa		13.35	□□□□□ -0.27
MRPL28-203	ENST00000429738	OR10W1	Q8NGF6	305 aa		13.35	□□□□□ -0.27
MRPL28-203	ENST00000429738	ZNF502	Q8TBZ5	544 aa		13.35	□□□□□ -0.27
MRPL28-203	ENST00000429738	CD7	P09564	240 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	RPA2	P15927	270 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	PTBP1	P26599	531 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	LPAR6	P43657	344 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	CD81	P60033	236 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	ERVK-16	P61578	105 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	WT1-AS	Q06250	92 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	FAM106A	Q4KMX7	169 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	GDPD1	Q8N9F7	314 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	OR1L8	Q8NGR8	309 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	CACNG8	Q8WXS5	425 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	NEURL2	Q9BR09	285 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	TUBA4B	Q9H853	241 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	PLEKHA3	Q9HB20	300 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	NDUFA4L2	Q9NRX3	87 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	SLC2A8	Q9NY64	477 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	THYN1	Q9P016	225 aa		13.34	□□□□□ -0.27
MRPL28-203	ENST00000429738	SMIM31	A0A1B0GVY4	71 aa		13.33	□□□□□ -0.28
MRPL28-203	ENST00000429738	SERPINE2	P07093	398 aa		13.33	□□□□□ -0.28
MRPL28-203	ENST00000429738	TRAPPC2	P0DI81	140 aa		13.33	□□□□□ -0.28
MRPL28-203	ENST00000429738	TRAPPC2B	P0DI82	140 aa		13.33	□□□□□ -0.28
MRPL28-203	ENST00000429738	ELK1	P19419	428 aa		13.33	□□□□□ -0.28
MRPL28-203	ENST00000429738	WDR89	Q96FK6	387 aa	Predicted RBP	13.33	□□□□□ -0.28
MRPL28-203	ENST00000429738	MLX	Q9UH92	298 aa		13.33	□□□□□ -0.28
MRPL28-203	ENST00000429738	HPGDS	O60760	199 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	KRAS	P01116	189 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	C8orf88	P0DMB2	117 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	OR13C7	P0DN81	318 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	GPR183	P32249	361 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	RCVRN	P35243	200 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	G6PC	P35575	357 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	LPCAT3	Q6P1A2	487 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	UNQ9165/PRO28630	Q6UXU0	137 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	SNX29P2	Q8IUI4	249 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	IL17D	Q8TAD2	202 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	VN1R17P	Q8TDU5	208 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	LSM10	Q969L4	123 aa	Known RBP	13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	CEPT1	Q9Y6K0	416 aa		13.32	□□□□□ -0.28
MRPL28-203	ENST00000429738	ZNF320	A2RRD8	509 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	TPPP	O94811	219 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	GABARAP	O95166	117 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	SMIM18	P0DKX4	95 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	RORC	P51449	518 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	MFAP2	P55001	183 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	UCP3	P55916	312 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	TSPAN5	P62079	268 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	CTF1	Q16619	201 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	PHLDA2	Q53GA4	152 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	TMEM61	Q8N0U2	210 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	UXS1	Q8NBZ7	420 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	NAA50	Q9GZZ1	169 aa	Known RBP	13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	WFDC10A	Q9H1F0	79 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	NSG2	Q9Y328	171 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	OR51B2	Q9Y5P1	312 aa		13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	F11R	Q9Y624	299 aa	Known RBP	13.31	□□□□□ -0.28
MRPL28-203	ENST00000429738	CYB5B	O43169	146 aa		13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	ELL	P55199	621 aa	Predicted RBP	13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	GUCA2B	Q16661	112 aa		13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	ZNF57	Q68EA5	555 aa	Predicted RBP	13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	PLET1	Q6UQ28	207 aa		13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	DEFB125	Q8N687	156 aa		13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	OR5B3	Q8NH48	314 aa		13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	MARC2	Q969Z3	335 aa		13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	ATP6V0B	Q99437	205 aa		13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	KRTAP17-1	Q9BYP8	105 aa		13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	HIPK2	Q9H2X6	1198 aa		13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	TMEM14B	Q9NUH8	114 aa		13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	ALMS1	Q8TCU4	4167 aa		13.3	□□□□□ -0.28
MRPL28-203	ENST00000429738	RBMY1B	A6NDE4	496 aa	Known RBP	13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	RBMY1E	A6NEQ0	496 aa	Known RBP	13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	DBX1	A6NMT0	343 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	C15orf61	A6NNL5	157 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	OR11H12	B2RN74	326 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	TGOLN2	O43493	480 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	SNAPC5	O75971	98 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	IGKV1-39	P01597	117 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	IGKV1D-39	P04432	117 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	RBMY1D	P0C7P1	496 aa	Known RBP	13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	TM4SF20	Q53R12	229 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	SLC25A24	Q6NUK1	477 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	TBC1D26	Q86UD7	250 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	SLC38A6	Q8IZM9	456 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	SEC22A	Q96IW7	307 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	TSC22D3	Q99576	134 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	FKBP11	Q9NYL4	201 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	MRPL27	Q9P0M9	148 aa	Known RBP	13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	PRND	Q9UKY0	176 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738	SELENOK	Q9Y6D0	94 aa		13.29	□□□□□ -0.28
MRPL28-203	ENST00000429738		F8W735	103 aa	Predicted RBP	13.28	□□□□□ -0.28
MRPL28-203	ENST00000429738		K7EIM0	57 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms