RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 RANGRFQ9HD47 186 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 AKIP1Q9NQ31 210 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 TMEM14BQ9NUH8 114 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 OR51B2Q9Y5P1 312 aa13.91□□□□□ -0.18
SEMA3B-201ENST00000416295 TEX50A0A1B0GTY4 177 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 IGLC7A0M8Q6 106 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 C15orf61A6NNL5 157 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 DEFA4P12838 97 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 CTRB1P17538 263 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 UCP1P25874 307 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 AKR1C2P52895 323 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 ATP5G2Q06055 141 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 SP6Q3SY56 376 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 FAM209BQ5JX69 171 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 ZNF343Q6P1L6 599 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 OR4A16Q8NH70 328 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 NAA60Q9H7X0 242 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 NSG2Q9Y328 171 aa13.9□□□□□ -0.18
SEMA3B-201ENST00000416295 CRYM-AS1A6NIL9 109 aa13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 HIST1H1BP16401 226 aaKnown RBP13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 ZP3P21754 424 aa13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 INPP1P49441 399 aa13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 DEFA5Q01523 94 aa13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 C9orf66Q5T8R8 295 aa13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 TRIQKQ629K1 86 aa13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 ZNF57Q68EA5 555 aaPredicted RBP13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 REC114Q7Z4M0 266 aa13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 SGPP2Q8IWX5 399 aa13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 LSM10Q969L4 123 aaKnown RBP13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 TMEM222Q9H0R3 208 aa13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 NDUFA4L2Q9NRX3 87 aa13.89□□□□□ -0.19
SEMA3B-201ENST00000416295 SEC14L6B5MCN3 397 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 CYB5BO43169 146 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 RBMXL2O75526 392 aaKnown RBP13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 OR2J3O76001 311 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 REG1AP05451 166 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 OR5AC1P0C628 307 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 SLURP1P55000 103 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 DHODHQ02127 395 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 EXOSC2Q13868 293 aaKnown RBP13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 KLK9Q2XQG4 91 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 C15orf32Q32M92 178 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 DCUN1D4Q92564 292 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 RRNAD1Q96FB5 475 aaKnown RBP13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 TMEM56Q96MV1 263 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 HINT2Q9BX68 163 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 PEF1Q9UBV8 284 aaKnown RBP13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 ZMAT5Q9UDW3 170 aaKnown RBP13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 KLK9Q9UKQ9 250 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 NOTCH3Q9UM47 2321 aa13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 PRKDCP78527 4128 aaKnown RBP13.88□□□□□ -0.19
SEMA3B-201ENST00000416295 ANKRD34BA5PLL1 514 aa13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 OVOL1O14753 267 aa13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 IGKV1-5P01602 117 aa13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 OR13C7P0DN81 318 aa13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 HOXD3P31249 432 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 OR10W1Q8NGF6 305 aa13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 RNASE11Q8TAA1 199 aaKnown RBP13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 GLYATL2Q8WU03 294 aa13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 DLX4Q92988 240 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 FANCD2OSQ96PS1 177 aa13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 FBXL7Q9UJT9 491 aa13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 KCNIP3Q9Y2W7 256 aa13.87□□□□□ -0.19
SEMA3B-201ENST00000416295 IGLV11-55A0A075B6I3 123 aa13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 A6NHS1 94 aa13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 CDS2O95674 445 aa13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 P0C879 139 aa13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 INSL3P51460 131 aa13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 WT1-ASQ06250 92 aa13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 EGFEM1PQ0D2K5 195 aa13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 BAK1Q16611 211 aa13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 C19orf35Q6ZS72 473 aa13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 RBPMSQ93062 196 aaKnown RBP13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 GALNT14Q96FL9 552 aa13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 SLC25A21Q9BQT8 299 aaPredicted RBP13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 THYN1Q9P016 225 aa13.86□□□□□ -0.19
SEMA3B-201ENST00000416295 DBX1A6NMT0 343 aa13.85□□□□□ -0.19
SEMA3B-201ENST00000416295 MECP2P51608 486 aaKnown RBP13.85□□□□□ -0.19
SEMA3B-201ENST00000416295 HSPE1P61604 102 aaKnown RBP13.85□□□□□ -0.19
SEMA3B-201ENST00000416295 LINC00299Q6ZSB3 139 aa13.85□□□□□ -0.19
SEMA3B-201ENST00000416295 ZNF429Q86V71 674 aa13.85□□□□□ -0.19
SEMA3B-201ENST00000416295 FAM219AQ8IW50 185 aa13.85□□□□□ -0.19
SEMA3B-201ENST00000416295 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.84□□□□□ -0.19
SEMA3B-201ENST00000416295 NAP1L6A6NFF2 107 aa13.84□□□□□ -0.19
SEMA3B-201ENST00000416295 ANXA3P12429 323 aa13.84□□□□□ -0.19
SEMA3B-201ENST00000416295 AKR1C4P17516 323 aa13.84□□□□□ -0.19
SEMA3B-201ENST00000416295 PRCDQ00LT1 54 aa13.84□□□□□ -0.19
SEMA3B-201ENST00000416295 IZUMO4Q1ZYL8 232 aa13.84□□□□□ -0.19
SEMA3B-201ENST00000416295 OR1L6Q8NGR2 347 aa13.84□□□□□ -0.19
SEMA3B-201ENST00000416295 IL22RA2Q969J5 263 aa13.84□□□□□ -0.19
SEMA3B-201ENST00000416295 TMEM230Q96A57 120 aa13.84□□□□□ -0.19
SEMA3B-201ENST00000416295 CXorf58Q96LI9 332 aa13.84□□□□□ -0.19
SEMA3B-201ENST00000416295 SDHCQ99643 169 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-201ENST00000416295 A0A0B4J293 547 aa13.83□□□□□ -0.2
SEMA3B-201ENST00000416295 PIGBOS1A0A0B4J2F0 54 aa13.83□□□□□ -0.2
SEMA3B-201ENST00000416295 NDUFB8O95169 186 aa13.83□□□□□ -0.2
SEMA3B-201ENST00000416295 TRBV12-3P01733 135 aa13.83□□□□□ -0.2
SEMA3B-201ENST00000416295 RBMS2Q15434 407 aaKnown RBP13.83□□□□□ -0.2
SEMA3B-201ENST00000416295 TATDN3Q17R31 274 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms