RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 LINC00482Q8N8I6 264 aa15.43■□□□□ 0.06
SNCA-203ENST00000394986 OR11H1Q8NG94 326 aa15.43■□□□□ 0.06
SNCA-203ENST00000394986 OR1L8Q8NGR8 309 aa15.43■□□□□ 0.06
SNCA-203ENST00000394986 OR4A16Q8NH70 328 aa15.43■□□□□ 0.06
SNCA-203ENST00000394986 GALNT14Q96FL9 552 aa15.43■□□□□ 0.06
SNCA-203ENST00000394986 TMEM14BQ9NUH8 114 aa15.43■□□□□ 0.06
SNCA-203ENST00000394986 CENPXA8MT69 81 aa15.42■□□□□ 0.06
SNCA-203ENST00000394986 LGALS1P09382 135 aaKnown RBP15.42■□□□□ 0.06
SNCA-203ENST00000394986 TRAPPC2P0DI81 140 aa15.42■□□□□ 0.06
SNCA-203ENST00000394986 TRAPPC2BP0DI82 140 aa15.42■□□□□ 0.06
SNCA-203ENST00000394986 MYCNOSP40205 109 aa15.42■□□□□ 0.06
SNCA-203ENST00000394986 RAB25P57735 213 aa15.42■□□□□ 0.06
SNCA-203ENST00000394986 SLC25A42Q86VD7 318 aa15.42■□□□□ 0.06
SNCA-203ENST00000394986 RNASE11Q8TAA1 199 aaKnown RBP15.42■□□□□ 0.06
SNCA-203ENST00000394986 C7orf50Q9BRJ6 194 aaKnown RBP15.42■□□□□ 0.06
SNCA-203ENST00000394986 NDUFA4L2Q9NRX3 87 aa15.42■□□□□ 0.06
SNCA-203ENST00000394986 FLVCR2Q9UPI3 526 aa15.42■□□□□ 0.06
SNCA-203ENST00000394986 ZNF257Q9Y2Q1 563 aa15.42■□□□□ 0.06
SNCA-203ENST00000394986 A0A0B4J293 547 aa15.41■□□□□ 0.06
SNCA-203ENST00000394986 NDUFB6O95139 128 aa15.41■□□□□ 0.06
SNCA-203ENST00000394986 CTRB1P17538 263 aa15.41■□□□□ 0.06
SNCA-203ENST00000394986 CD33P20138 364 aa15.41■□□□□ 0.06
SNCA-203ENST00000394986 RHOGP84095 191 aa15.41■□□□□ 0.06
SNCA-203ENST00000394986 RUNX1Q01196 453 aa15.41■□□□□ 0.06
SNCA-203ENST00000394986 WT1-ASQ06250 92 aa15.41■□□□□ 0.06
SNCA-203ENST00000394986 CTRB2Q6GPI1 263 aa15.41■□□□□ 0.06
SNCA-203ENST00000394986 RBPMSQ93062 196 aaKnown RBP15.41■□□□□ 0.06
SNCA-203ENST00000394986 TMEM56Q96MV1 263 aa15.41■□□□□ 0.06
SNCA-203ENST00000394986 KCNIP3Q9Y2W7 256 aa15.41■□□□□ 0.06
SNCA-203ENST00000394986 TMEM56-RWDD3S4R434 201 aa15.41■□□□□ 0.06
SNCA-203ENST00000394986 C13orf42A0A1B0GVH6 325 aa15.4■□□□□ 0.06
SNCA-203ENST00000394986 LYRM1O43325 122 aa15.4■□□□□ 0.06
SNCA-203ENST00000394986 OR2J3O76001 311 aa15.4■□□□□ 0.06
SNCA-203ENST00000394986 ATG12O94817 140 aa15.4■□□□□ 0.06
SNCA-203ENST00000394986 BRI3O95415 125 aa15.4■□□□□ 0.06
SNCA-203ENST00000394986 CRYGCP07315 174 aa15.4■□□□□ 0.06
SNCA-203ENST00000394986 ZNF846Q147U1 533 aa15.4■□□□□ 0.06
SNCA-203ENST00000394986 SPINK9Q5DT21 86 aa15.4■□□□□ 0.06
SNCA-203ENST00000394986 Q6ZRM9 215 aa15.4■□□□□ 0.06
SNCA-203ENST00000394986 CENPSQ8N2Z9 138 aa15.4■□□□□ 0.06
SNCA-203ENST00000394986 OR1N2Q8NGR9 330 aa15.4■□□□□ 0.06
SNCA-203ENST00000394986 RRNAD1Q96FB5 475 aaKnown RBP15.4■□□□□ 0.06
SNCA-203ENST00000394986 WDR12Q9GZL7 423 aaKnown RBP15.4■□□□□ 0.06
SNCA-203ENST00000394986 IGHV4OR15-8A0A075B7B6 117 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 A0A087WW49 117 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 TRBV9A0A0B4J1U6 114 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 OR13C7P0DN81 318 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 VAMP1P23763 118 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 PPP1R1AQ13522 171 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 FHL3Q13643 280 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 TMEM128Q5BJH2 165 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 C1QL4Q86Z23 238 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 SLC35G3Q8N808 338 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 OR5B3Q8NH48 314 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 LSM10Q969L4 123 aaKnown RBP15.39■□□□□ 0.05
SNCA-203ENST00000394986 FANCD2OSQ96PS1 177 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 FKBP11Q9NYL4 201 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 DMRT1Q9Y5R6 373 aa15.39■□□□□ 0.05
SNCA-203ENST00000394986 A0A0G2JLM5 398 aa15.38■□□□□ 0.05
SNCA-203ENST00000394986 G3V4G9 280 aa15.38■□□□□ 0.05
SNCA-203ENST00000394986 IGLL1P15814 213 aa15.38■□□□□ 0.05
SNCA-203ENST00000394986 ZNF616Q08AN1 781 aa15.38■□□□□ 0.05
SNCA-203ENST00000394986 WFDC9Q8NEX5 89 aa15.38■□□□□ 0.05
SNCA-203ENST00000394986 GPR146Q96CH1 333 aa15.38■□□□□ 0.05
SNCA-203ENST00000394986 SRSF8Q9BRL6 282 aaKnown RBP15.38■□□□□ 0.05
SNCA-203ENST00000394986 TBC1D24Q9ULP9 559 aa15.38■□□□□ 0.05
SNCA-203ENST00000394986 ANKRD34BA5PLL1 514 aa15.37■□□□□ 0.05
SNCA-203ENST00000394986 ST8SIA3O43173 380 aa15.37■□□□□ 0.05
SNCA-203ENST00000394986 NDUFB8O95169 186 aa15.37■□□□□ 0.05
SNCA-203ENST00000394986 ANXA3P12429 323 aa15.37■□□□□ 0.05
SNCA-203ENST00000394986 DEFA4P12838 97 aa15.37■□□□□ 0.05
SNCA-203ENST00000394986 MECP2P51608 486 aaKnown RBP15.37■□□□□ 0.05
SNCA-203ENST00000394986 ANKRD55Q3KP44 614 aa15.37■□□□□ 0.05
SNCA-203ENST00000394986 OXLD1Q5BKU9 147 aa15.37■□□□□ 0.05
SNCA-203ENST00000394986 THOC7Q6I9Y2 204 aaKnown RBP15.37■□□□□ 0.05
SNCA-203ENST00000394986 LYZL2Q7Z4W2 148 aa15.37■□□□□ 0.05
SNCA-203ENST00000394986 FBXL7Q9UJT9 491 aa15.37■□□□□ 0.05
SNCA-203ENST00000394986 S4R3C0 116 aa15.37■□□□□ 0.05
SNCA-203ENST00000394986 IGLV11-55A0A075B6I3 123 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 FAM223BA6NKX1 122 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 TRBV12-3P01733 135 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 SLURP1P55000 103 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 HSPE1P61604 102 aaKnown RBP15.36■□□□□ 0.05
SNCA-203ENST00000394986 PRCDQ00LT1 54 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 EXOSC2Q13868 293 aaKnown RBP15.36■□□□□ 0.05
SNCA-203ENST00000394986 C15orf32Q32M92 178 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 ZNF429Q86V71 674 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 FAM223AQ8IWN6 122 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 NECAP1Q8NC96 275 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 DPF1Q92782 380 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 IL22RA2Q969J5 263 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 USMG5Q96IX5 58 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 CACNG5Q9UF02 275 aa15.36■□□□□ 0.05
SNCA-203ENST00000394986 LINC01619G3V211 115 aa15.35■□□□□ 0.05
SNCA-203ENST00000394986 SFT2D2O95562 160 aa15.35■□□□□ 0.05
SNCA-203ENST00000394986 DHFRP00374 187 aa15.35■□□□□ 0.05
SNCA-203ENST00000394986 IGHV3-23P01764 117 aa15.35■□□□□ 0.05
SNCA-203ENST00000394986 ANXA7P20073 488 aaKnown RBP15.35■□□□□ 0.05
SNCA-203ENST00000394986 IFITM3Q01628 133 aa15.35■□□□□ 0.05
SNCA-203ENST00000394986 ATP5G2Q06055 141 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms