RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 PEAR1Q5VY43 1037 aaPredicted RBP14.46□□□□□ -0.09
PTP4A1-201ENST00000370651 OR13A1Q8NGR1 328 aa14.46□□□□□ -0.09
PTP4A1-201ENST00000370651 CGB1A6NKQ9 187 aa14.46□□□□□ -0.1
PTP4A1-201ENST00000370651 NDUFA2O43678 99 aa14.46□□□□□ -0.1
PTP4A1-201ENST00000370651 GFRA1P56159 465 aa14.46□□□□□ -0.1
PTP4A1-201ENST00000370651 CX3CL1P78423 397 aa14.46□□□□□ -0.1
PTP4A1-201ENST00000370651 PPP1R32Q7Z5V6 425 aa14.46□□□□□ -0.1
PTP4A1-201ENST00000370651 MBD3L1Q8WWY6 194 aa14.46□□□□□ -0.1
PTP4A1-201ENST00000370651 PSME4Q14997 1843 aa14.46□□□□□ -0.1
PTP4A1-201ENST00000370651 PLXNA1Q9UIW2 1896 aa14.45□□□□□ -0.1
PTP4A1-201ENST00000370651 MIR17HGQ75NE6 70 aa14.45□□□□□ -0.1
PTP4A1-201ENST00000370651 LDLRAD4O15165 306 aa14.45□□□□□ -0.1
PTP4A1-201ENST00000370651 NAPSAO96009 420 aa14.45□□□□□ -0.1
PTP4A1-201ENST00000370651 METTL26Q96S19 204 aa14.45□□□□□ -0.1
PTP4A1-201ENST00000370651 IZUMO1RA6ND01 250 aa14.45□□□□□ -0.1
PTP4A1-201ENST00000370651 GBF1Q92538 1859 aa14.45□□□□□ -0.1
PTP4A1-201ENST00000370651 SPAARA0A1B0GVQ0 90 aa14.45□□□□□ -0.1
PTP4A1-201ENST00000370651 CTSSP25774 331 aa14.45□□□□□ -0.1
PTP4A1-201ENST00000370651 LOXL3P58215 753 aa14.45□□□□□ -0.1
PTP4A1-201ENST00000370651 OSR1Q8TAX0 266 aaPredicted RBP14.44□□□□□ -0.1
PTP4A1-201ENST00000370651 RELQ04864 619 aaPredicted RBP14.44□□□□□ -0.1
PTP4A1-201ENST00000370651 TIMP4Q99727 224 aa14.44□□□□□ -0.1
PTP4A1-201ENST00000370651 SOX21Q9Y651 276 aaPredicted RBP14.44□□□□□ -0.1
PTP4A1-201ENST00000370651 SNAI2O43623 268 aa14.44□□□□□ -0.1
PTP4A1-201ENST00000370651 APOHP02749 345 aaPredicted RBP14.44□□□□□ -0.1
PTP4A1-201ENST00000370651 FAM131CQ96AQ9 280 aa14.44□□□□□ -0.1
PTP4A1-201ENST00000370651 CRXO43186 299 aaPredicted RBP14.44□□□□□ -0.1
PTP4A1-201ENST00000370651 AMBPP02760 352 aa14.44□□□□□ -0.1
PTP4A1-201ENST00000370651 MST1P26927 711 aa14.44□□□□□ -0.1
PTP4A1-201ENST00000370651 PLPPR1Q8TBJ4 325 aa14.44□□□□□ -0.1
PTP4A1-201ENST00000370651 TP53BP1Q12888 1972 aaPredicted RBP14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 A0A1B0GUT8 65 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 CD55P08174 381 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 Q6ZT83 130 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 KLK15Q9H2R5 256 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 GPR6P46095 362 aaPredicted RBP14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 SAPCD1Q5SSQ6 148 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 VWCEQ96DN2 955 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 ALKBH7Q9BT30 221 aaPredicted RBP14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 PHLDA3Q9Y5J5 127 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 TNS1Q9HBL0 1735 aaKnown RBP14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 NKX2-8O15522 239 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 STARD6P59095 220 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 FAM166AQ6J272 317 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 ARL6IP6Q8N6S5 226 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 GTF3AQ92664 365 aaKnown RBP14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 WBP1Q96G27 269 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 RPP21Q9H633 154 aaKnown RBP14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 IL4P05112 153 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 PRELID3AQ96N28 172 aa14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 RNASE7Q9H1E1 156 aaKnown RBP14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 ZNF703Q9H7S9 590 aaPredicted RBP14.43□□□□□ -0.1
PTP4A1-201ENST00000370651 A0A1B0GW64 132 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 OR11H12B2RN74 326 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 DNM1P46Q6ZS02 220 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 OR11H1Q8NG94 326 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 OR11H2Q8NH07 326 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 PILRBQ9UKJ0 227 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 EPOPA6NHQ4 379 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 DCTN5Q9BTE1 182 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 AKIRIN1Q9H9L7 192 aaPredicted RBP14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 GP6Q9HCN6 339 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 TRBV20OR9-2A0A075B6H5 130 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 CELA3AP09093 270 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 GATA2P23769 480 aaPredicted RBP14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 UNQ5815/PRO19632Q6UWF5 114 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 VSIRQ9H7M9 311 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 CLDN16Q9Y5I7 305 aa14.42□□□□□ -0.1
PTP4A1-201ENST00000370651 PGPEP1LA6NFU8 196 aa14.41□□□□□ -0.1
PTP4A1-201ENST00000370651 LINC00271P0C7V0 271 aa14.41□□□□□ -0.1
PTP4A1-201ENST00000370651 FAM106CPP0CH98 169 aa14.41□□□□□ -0.1
PTP4A1-201ENST00000370651 C18orf15Q96N68 181 aa14.41□□□□□ -0.1
PTP4A1-201ENST00000370651 TRAV8-6A0A0B4J262 113 aa14.41□□□□□ -0.1
PTP4A1-201ENST00000370651 HIGD1CA8MV81 97 aa14.41□□□□□ -0.1
PTP4A1-201ENST00000370651 TMEM144Q7Z5S9 345 aa14.41□□□□□ -0.1
PTP4A1-201ENST00000370651 CACNG8Q8WXS5 425 aa14.41□□□□□ -0.1
PTP4A1-201ENST00000370651 PRSS2P07478 247 aa14.41□□□□□ -0.1
PTP4A1-201ENST00000370651 ACSF3Q4G176 576 aaPredicted RBP14.41□□□□□ -0.1
PTP4A1-201ENST00000370651 OR52E5Q8NH55 327 aa14.41□□□□□ -0.1
PTP4A1-201ENST00000370651 PSG7Q13046 419 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 TM4SF20Q53R12 229 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 PYY3Q5JQD4 70 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 FAM53AQ6NSI3 398 aaPredicted RBP14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 OCC1Q8TAD7 63 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 LPAR2Q9HBW0 351 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 TMEM160Q9NX00 188 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 RALGAPA1Q6GYQ0 2036 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 LOC285556D6RIA3 1793 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 TRAV1-1A0A0B4J248 108 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 HIST1H1AQ02539 215 aaPredicted RBP14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 SRSF4Q08170 494 aaKnown RBP14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 SHISA5Q8N114 240 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 UBTD1Q9HAC8 227 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 ATXN7O15265 892 aaPredicted RBP14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 LGALS3P17931 250 aaKnown RBP14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 OSTCQ9NRP0 149 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 PPIAL4CA0A0B4J2A2 164 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 A0A1W2PS18 150 aa14.4□□□□□ -0.1
PTP4A1-201ENST00000370651 PPIAL4GP0DN37 164 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms