RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 ATG12O94817 140 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 BRI3O95415 125 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 KRASP01116 189 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 FGF2P09038 288 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 RPA2P15927 270 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 PIGPP57054 158 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 RND3P61587 244 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 FHL3Q13643 280 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 ASPHD1Q5U4P2 390 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 FAAP20Q6NZ36 180 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 REC114Q7Z4M0 266 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 ADAD2Q8NCV1 583 aaKnown RBP13.21□□□□□ -0.29
LIN28B-202ENST00000635857 USMG5Q96IX5 58 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 SCP2D1Q9UJQ7 156 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 ZNF257Q9Y2Q1 563 aa13.21□□□□□ -0.29
LIN28B-202ENST00000635857 ANKRD20A5PA0PJZ0 165 aa13.2□□□□□ -0.3
LIN28B-202ENST00000635857 FAM223BA6NKX1 122 aa13.2□□□□□ -0.3
LIN28B-202ENST00000635857 HSPB1P04792 205 aaKnown RBP13.2□□□□□ -0.3
LIN28B-202ENST00000635857 ZNF735P0CB33 412 aa13.2□□□□□ -0.3
LIN28B-202ENST00000635857 DEFA4P12838 97 aa13.2□□□□□ -0.3
LIN28B-202ENST00000635857 PI3P19957 117 aa13.2□□□□□ -0.3
LIN28B-202ENST00000635857 PTBP1P26599 531 aaKnown RBP eCLIP13.2□□□□□ -0.35e-9■■□□□ 12.6
LIN28B-202ENST00000635857 G6PCP35575 357 aa13.2□□□□□ -0.3
LIN28B-202ENST00000635857 THOC7Q6I9Y2 204 aaKnown RBP13.2□□□□□ -0.3
LIN28B-202ENST00000635857 FAM223AQ8IWN6 122 aa13.2□□□□□ -0.3
LIN28B-202ENST00000635857 Q8N402 240 aa13.2□□□□□ -0.3
LIN28B-202ENST00000635857 TTC9CQ8N5M4 171 aa13.2□□□□□ -0.3
LIN28B-202ENST00000635857 OR4C16Q8NGL9 310 aa13.2□□□□□ -0.3
LIN28B-202ENST00000635857 THAP7Q9BT49 309 aaPredicted RBP13.2□□□□□ -0.3
LIN28B-202ENST00000635857 ALX4Q9H161 411 aaPredicted RBP13.2□□□□□ -0.3
LIN28B-202ENST00000635857 MCUBQ9NWR8 336 aa13.2□□□□□ -0.3
LIN28B-202ENST00000635857 HMX3A6NHT5 357 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 H0Y980 276 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 CYB5BO43169 146 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 CTSDP07339 412 aaPredicted RBP13.19□□□□□ -0.3
LIN28B-202ENST00000635857 SURF2Q15527 256 aaPredicted RBP13.19□□□□□ -0.3
LIN28B-202ENST00000635857 KPRPQ5T749 579 aaPredicted RBP13.19□□□□□ -0.3
LIN28B-202ENST00000635857 C9orf66Q5T8R8 295 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 FOXB2Q5VYV0 432 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 H2BFWTQ7Z2G1 175 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 TOMM5Q8N4H5 51 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 OR13C8Q8NGS7 320 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 MARCH1Q8TCQ1 289 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 SCGB3A2Q96PL1 93 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 QTRT1Q9BXR0 403 aaKnown RBP13.19□□□□□ -0.3
LIN28B-202ENST00000635857 RANGRFQ9HD47 186 aaPredicted RBP13.19□□□□□ -0.3
LIN28B-202ENST00000635857 FKBP11Q9NYL4 201 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 PRNDQ9UKY0 176 aa13.19□□□□□ -0.3
LIN28B-202ENST00000635857 C3orf85A0A1B0GTC6 90 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 NPIPB5A8MRT5 1133 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 SEC14L6B5MCN3 397 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 TEX22C9J3V5 150 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 OVOL1O14753 267 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 RBMXL2O75526 392 aaKnown RBP13.18□□□□□ -0.3
LIN28B-202ENST00000635857 B3GALNT1O75752 331 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 IL6RP08887 468 aaPredicted RBP13.18□□□□□ -0.3
LIN28B-202ENST00000635857 ZP3P21754 424 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 INPP1P49441 399 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 AKR1C2P52895 323 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 RHOGP84095 191 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 ATP5G2Q06055 141 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 TRIM16LQ309B1 348 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 ZNF585BQ52M93 769 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 HSD17B13Q7Z5P4 300 aaPredicted RBP13.18□□□□□ -0.3
LIN28B-202ENST00000635857 OR1L8Q8NGR8 309 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 OR4A16Q8NH70 328 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 RNASE11Q8TAA1 199 aaKnown RBP13.18□□□□□ -0.3
LIN28B-202ENST00000635857 SRSF8Q9BRL6 282 aaKnown RBP13.18□□□□□ -0.3
LIN28B-202ENST00000635857 TNCP24821 2201 aa13.18□□□□□ -0.3
LIN28B-202ENST00000635857 IGHV4OR15-8A0A075B7B6 117 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 A0A087WW49 117 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 TRAV3A0A0B4J244 114 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 TEX13DA0A0J9YY54 714 aaPredicted RBP13.17□□□□□ -0.3
LIN28B-202ENST00000635857 ANKRD34BA5PLL1 514 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 TRAPPC2P0DI81 140 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 TRAPPC2BP0DI82 140 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 HIST1H1BP16401 226 aaKnown RBP13.17□□□□□ -0.3
LIN28B-202ENST00000635857 PSMB6P28072 239 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 OR2B8PP59922 312 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 FAM209BQ5JX69 171 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 CADM3Q8N126 398 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 NECAP1Q8NC96 275 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 OR51S1Q8NGJ8 323 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 SOSTQ9BQB4 213 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 HINT2Q9BX68 163 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 OR51B2Q9Y5P1 312 aa13.17□□□□□ -0.3
LIN28B-202ENST00000635857 PRH1P02810 166 aa13.16□□□□□ -0.3
LIN28B-202ENST00000635857 MECP2P51608 486 aaKnown RBP13.16□□□□□ -0.3
LIN28B-202ENST00000635857 SLURP1P55000 103 aa13.16□□□□□ -0.3
LIN28B-202ENST00000635857 DEFA5Q01523 94 aa13.16□□□□□ -0.3
LIN28B-202ENST00000635857 EXOSC2Q13868 293 aaKnown RBP13.16□□□□□ -0.3
LIN28B-202ENST00000635857 PDLIM3Q53GG5 364 aaPredicted RBP13.16□□□□□ -0.3
LIN28B-202ENST00000635857 CCDC190Q86UF4 302 aa13.16□□□□□ -0.3
LIN28B-202ENST00000635857 MRGPRFQ96AM1 343 aa13.16□□□□□ -0.3
LIN28B-202ENST00000635857 TMEM56Q96MV1 263 aa13.16□□□□□ -0.3
LIN28B-202ENST00000635857 AKIP1Q9NQ31 210 aa13.16□□□□□ -0.3
LIN28B-202ENST00000635857 PEF1Q9UBV8 284 aaKnown RBP13.16□□□□□ -0.3
LIN28B-202ENST00000635857 V9GYH0 126 aa13.16□□□□□ -0.3
LIN28B-202ENST00000635857 MEGF8Q7Z7M0 2845 aa13.16□□□□□ -0.3
LIN28B-202ENST00000635857 OR2J3O76001 311 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms