RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 TNFSF12O43508 249 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 OR2J3O76001 311 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 KBTBD11O94819 623 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 RBMY1DP0C7P1 496 aaKnown RBP11.11□□□□□ -0.63
PNKP-202ENST00000593706 ELK1P19419 428 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 RFX2P48378 723 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 FAM209BQ5JX69 171 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 SLC25A42Q86VD7 318 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 LYSMD2Q8IV50 215 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 MMD2Q8IY49 270 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 ZBTB34Q8NCN2 500 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 TMEM167AQ8TBQ9 72 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 MOB3AQ96BX8 217 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 MRPS26Q9BYN8 205 aaKnown RBP11.11□□□□□ -0.63
PNKP-202ENST00000593706 SLC5A7Q9GZV3 580 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 IFT46Q9NQC8 304 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 DPPA5A6NC42 116 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 C2orf70A6NJV1 201 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 ZNF785A8K8V0 405 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 E7EUB6 86 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 HPGDSO60760 199 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 HLA-AP01891 365 aaKnown RBP11.1□□□□□ -0.63
PNKP-202ENST00000593706 FOLR2P14207 255 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 GNRHRP30968 328 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 PRSS3P35030 304 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 KIR2DS2P43631 304 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 TAS2R46P59540 309 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 FXYD4P59646 89 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 POU2AF1Q16633 256 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 DEFB114Q30KQ6 69 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 SLC16A13Q7RTY0 426 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 WDR89Q96FK6 387 aaPredicted RBP11.1□□□□□ -0.63
PNKP-202ENST00000593706 OR2A7Q96R45 310 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 FXYD6Q9H0Q3 95 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 SCPEP1Q9HB40 452 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 TECRQ9NZ01 308 aaKnown RBP11.1□□□□□ -0.63
PNKP-202ENST00000593706 EHFQ9NZC4 300 aa11.1□□□□□ -0.63
PNKP-202ENST00000593706 SULT1C2O00338 296 aa11.09□□□□□ -0.63
PNKP-202ENST00000593706 GGCTO75223 188 aaKnown RBP11.09□□□□□ -0.63
PNKP-202ENST00000593706 IL6RP08887 468 aaPredicted RBP11.09□□□□□ -0.63
PNKP-202ENST00000593706 EDN2P20800 178 aa11.09□□□□□ -0.63
PNKP-202ENST00000593706 RORCP51449 518 aa11.09□□□□□ -0.63
PNKP-202ENST00000593706 GPR107Q5VW38 600 aa11.09□□□□□ -0.63
PNKP-202ENST00000593706 TMEM17Q86X19 198 aa11.09□□□□□ -0.63
PNKP-202ENST00000593706 TTC9CQ8N5M4 171 aa11.09□□□□□ -0.63
PNKP-202ENST00000593706 VSTM2AQ8TAG5 236 aa11.09□□□□□ -0.63
PNKP-202ENST00000593706 ZC4H2Q9NQZ6 224 aa11.09□□□□□ -0.63
PNKP-202ENST00000593706 ZNF257Q9Y2Q1 563 aa11.09□□□□□ -0.63
PNKP-202ENST00000593706 SELENOKQ9Y6D0 94 aa11.09□□□□□ -0.63
PNKP-202ENST00000593706 CGB1A6NKQ9 187 aa11.08□□□□□ -0.64
PNKP-202ENST00000593706 PMP2P02689 132 aa11.08□□□□□ -0.64
PNKP-202ENST00000593706 ZNF735P0CB33 412 aa11.08□□□□□ -0.64
PNKP-202ENST00000593706 HRH1P35367 487 aa11.08□□□□□ -0.64
PNKP-202ENST00000593706 ARL3P36405 182 aa11.08□□□□□ -0.64
PNKP-202ENST00000593706 KLK9Q2XQG4 91 aa11.08□□□□□ -0.64
PNKP-202ENST00000593706 SPAG16Q8N0X2 631 aa11.08□□□□□ -0.64
PNKP-202ENST00000593706 OR5H2Q8NGV7 314 aa11.08□□□□□ -0.64
PNKP-202ENST00000593706 CACNG8Q8WXS5 425 aa11.08□□□□□ -0.64
PNKP-202ENST00000593706 FYTTD1Q96QD9 318 aaKnown RBP11.08□□□□□ -0.64
PNKP-202ENST00000593706 ZNF2Q9BSG1 426 aaPredicted RBP11.08□□□□□ -0.64
PNKP-202ENST00000593706 BET1LQ9NYM9 111 aa11.08□□□□□ -0.64
PNKP-202ENST00000593706 KLK9Q9UKQ9 250 aa11.08□□□□□ -0.64
PNKP-202ENST00000593706 HMX3A6NHT5 357 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 LGALS9O00182 355 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 OR2C1O95371 312 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 HRASP01112 189 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 IGHV3-23P01764 117 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 FGF2P09038 288 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 ZNF182P17025 639 aaPredicted RBP11.07□□□□□ -0.64
PNKP-202ENST00000593706 MAS1LP35410 378 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 TAS2R31P59538 309 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 HERV-K104P61576 105 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 OR4A47Q6IF82 309 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 C19orf35Q6ZS72 473 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 SNX29P2Q8IUI4 249 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 OR52B4Q8NGK2 314 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 PLEKHA2Q9HB19 425 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 FBXL7Q9UJT9 491 aa11.07□□□□□ -0.64
PNKP-202ENST00000593706 ZNF320A2RRD8 509 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 NPIPB5A8MRT5 1133 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 PGLYRP1O75594 196 aaPredicted RBP11.06□□□□□ -0.64
PNKP-202ENST00000593706 S1PR2O95136 353 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 DHFRP00374 187 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 MYOD1P15172 320 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 HLA-GP17693 338 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 CBLN1P23435 193 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 HLA-DMAP28067 261 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 RCVRNP35243 200 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 RPL27AP46776 148 aaKnown RBP11.06□□□□□ -0.64
PNKP-202ENST00000593706 RPL8P62917 257 aaKnown RBP11.06□□□□□ -0.64
PNKP-202ENST00000593706 CATR1Q13166 79 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 SPCS2Q15005 226 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 ZNF57Q68EA5 555 aaPredicted RBP11.06□□□□□ -0.64
PNKP-202ENST00000593706 SSX9Q7RTT3 188 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 TMEM61Q8N0U2 210 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 OR51H1Q8NH63 302 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 OR4A5Q8NH83 315 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 CD300LFQ8TDQ1 290 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 LINC00476Q8WZB0 136 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 AP3S1Q92572 193 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms