RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 TREML4Q6UXN2 200 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 MIR17HGQ75NE6 70 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 SFRP2Q96HF1 295 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 CIB3Q96Q77 187 aaPredicted RBP7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 OR2V2Q96R30 315 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 MGST2Q99735 147 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 HSPB9Q9BQS6 159 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 CXXC4Q9H2H0 198 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 PPIAL4AQ9Y536 164 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 CRYBB3P26998 211 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 GABRA6Q16445 453 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 DEFB109BQ30KR1 87 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 ZNF718Q3SXZ3 478 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 FAM214BQ7L5A3 538 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 OR10G8Q8NGN5 311 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 TMEM170AQ8WVE7 144 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 WIPI2Q9Y4P8 454 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 TMEM250H0YL14 139 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 SS18L1O75177 396 aaPredicted RBP7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 C11orf53Q8IXP5 236 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 STPG3Q8N7X2 389 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 TMEM178AQ8NBL3 297 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 OR1L6Q8NGR2 347 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 BTF3L4Q96K17 158 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 GP6Q9HCN6 339 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 PARD6AQ9NPB6 346 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 TUBG2Q9NRH3 451 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 TCF19Q9Y242 345 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 TRBV6-6A0A0A6YYG2 114 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 PMS2P5A8MQ11 134 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 AHRRA9YTQ3 701 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 RAB29O14966 203 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 PROP1O75360 226 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 DUTP33316 252 aaKnown RBP7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 CDKN1AP38936 164 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 DLX1P56177 255 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 SPCS3P61009 180 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 SRSF7Q16629 238 aaKnown RBP eCLIP7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 C1orf229Q6ZS94 237 aaPredicted RBP7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 ITLN1Q8WWA0 313 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 CCL13Q99616 98 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 SERF1AO75920 110 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 IL6RP08887 468 aaPredicted RBP7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 MSMPQ1L6U9 139 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 ACTL10Q5JWF8 245 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 PQLC2Q6ZP29 291 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 FAM216BQ8N7L0 139 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 ANAPC16Q96DE5 110 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 LINC00479Q96M42 142 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 GGTLC1Q9BX51 225 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 NAT8BQ9UHF3 227 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 CACNA1BQ00975 2339 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 CA2P00918 260 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 REG1AP05451 166 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 ZNF25P17030 456 aaPredicted RBP7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 TFPI2P48307 235 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 ATP6V1FQ16864 119 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 IQCJQ1A5X6 159 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 SP5Q6BEB4 398 aaPredicted RBP7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 CFAP161Q6P656 301 aa7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 GMPPAQ96IJ6 420 aaPredicted RBP7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 MRPL18Q9H0U6 180 aaKnown RBP7.42□□□□□ -1.22
HDGFL3-206ENST00000568294 AKAP6Q13023 2319 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 IGKV1D-17A0A075B6S4 117 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 A8MWP6 167 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 IQCF6A8MYZ5 107 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 CRISP2P16562 243 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 NPY1RP25929 384 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 SUMO1P63165 101 aaKnown RBP7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 CCL8P80075 99 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 FAM19A2Q8N3H0 131 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 MDS2Q8NDY4 140 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 OR10W1Q8NGF6 305 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 GUCD1Q96NT3 240 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 UHRF2Q96PU4 802 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 NAGKQ9UJ70 344 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 CSMD1Q96PZ7 3565 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 ABCA4P78363 2273 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 IGHV3-72A0A0B4J1Y9 119 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 TRAV5A0A0B4J249 113 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 FAM90A26D6RGX4 464 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 H0Y8G0 127 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 MMP23AO75900 390 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 SLC35E4Q6ICL7 350 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 DEFB124Q8NES8 71 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 H1FXQ92522 213 aaKnown RBP7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 TMEM242Q9NWH2 141 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 WDR83OSQ9Y284 106 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 POLR3KQ9Y2Y1 108 aaPredicted RBP7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 MRPS18CQ9Y3D5 142 aaKnown RBP7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 KALRNO60229 2985 aa7.41□□□□□ -1.22
HDGFL3-206ENST00000568294 KIR2DL2P43627 348 aaPredicted RBP7.4□□□□□ -1.22
HDGFL3-206ENST00000568294 TMEM95Q3KNT9 176 aa7.4□□□□□ -1.22
HDGFL3-206ENST00000568294 KRTCAP3Q53RY4 240 aa7.4□□□□□ -1.22
HDGFL3-206ENST00000568294 C10orf55Q5SWW7 151 aa7.4□□□□□ -1.22
HDGFL3-206ENST00000568294 SLC24A4Q8NFF2 622 aa7.4□□□□□ -1.22
HDGFL3-206ENST00000568294 SNHG12Q9BXW3 62 aa7.4□□□□□ -1.22
HDGFL3-206ENST00000568294 SAA2-SAA4A0A096LPE2 208 aa7.4□□□□□ -1.22
HDGFL3-206ENST00000568294 IGHV2OR16-5A0A0B4J2B6 119 aa7.4□□□□□ -1.22
HDGFL3-206ENST00000568294 PIGBOS1A0A0B4J2F0 54 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms