RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 SEC22AQ96IW7 307 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 UBE2E2Q96LR5 201 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 SPIN2AQ99865 258 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 SPIN2BQ9BPZ2 258 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 CRYM-AS1A6NIL9 109 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 CGB1A6NKQ9 187 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 H3BUA1 57 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 B3GALNT1O75752 331 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 SERPINE2P07093 398 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 IL7P13232 177 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 MYOD1P15172 320 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 UCP1P25874 307 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 RPL27AP46776 148 aaKnown RBP13.09□□□□□ -0.31
RPL28-209ENST00000560055 ZNF57Q68EA5 555 aaPredicted RBP13.09□□□□□ -0.31
RPL28-209ENST00000560055 C8orf86Q6ZUL3 223 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 ADAD2Q8NCV1 583 aaKnown RBP13.09□□□□□ -0.31
RPL28-209ENST00000560055 KLHL30-AS1Q8NEE0 82 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 OR5T1Q8NG75 326 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 CASTOR1Q8WTX7 329 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 TMEM230Q96A57 120 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 SCGB3A2Q96PL1 93 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 NAA60Q9H7X0 242 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 NOTCH3Q9UM47 2321 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 NOTCH1P46531 2555 aa13.09□□□□□ -0.31
RPL28-209ENST00000560055 APELAP0DMC3 54 aa13.08□□□□□ -0.32
RPL28-209ENST00000560055 OR2B8PP59922 312 aa13.08□□□□□ -0.32
RPL28-209ENST00000560055 SP6Q3SY56 376 aa13.08□□□□□ -0.32
RPL28-209ENST00000560055 C4orf3Q8WVX3 66 aa13.08□□□□□ -0.32
RPL28-209ENST00000560055 PHB2Q99623 299 aa13.08□□□□□ -0.32
RPL28-209ENST00000560055 SLA2Q9H6Q3 261 aa13.08□□□□□ -0.32
RPL28-209ENST00000560055 GNB4Q9HAV0 340 aa13.08□□□□□ -0.32
RPL28-209ENST00000560055 NUDT19A8MXV4 375 aa13.07□□□□□ -0.32
RPL28-209ENST00000560055 OR5AC1P0C628 307 aa13.07□□□□□ -0.32
RPL28-209ENST00000560055 OR9G9P0C7N8 305 aa13.07□□□□□ -0.32
RPL28-209ENST00000560055 P0C879 139 aa13.07□□□□□ -0.32
RPL28-209ENST00000560055 RUNX1Q01196 453 aa13.07□□□□□ -0.32
RPL28-209ENST00000560055 TTC9CQ8N5M4 171 aa13.07□□□□□ -0.32
RPL28-209ENST00000560055 GLYATL2Q8WU03 294 aa13.07□□□□□ -0.32
RPL28-209ENST00000560055 GALNT14Q96FL9 552 aa13.07□□□□□ -0.32
RPL28-209ENST00000560055 SLC25A21Q9BQT8 299 aaPredicted RBP13.07□□□□□ -0.32
RPL28-209ENST00000560055 TMEM222Q9H0R3 208 aa13.07□□□□□ -0.32
RPL28-209ENST00000560055 TGP01266 2768 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 TEX13DA0A0J9YY54 714 aaPredicted RBP13.06□□□□□ -0.32
RPL28-209ENST00000560055 NAP1L6A6NFF2 107 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 HMX3A6NHT5 357 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 I3L521 148 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 CDS2O95674 445 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 IGKV1-5P01602 117 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 CD40LGP29965 261 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 WFDC9Q8NEX5 89 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 S100ZQ8WXG8 99 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 RAX2Q96IS3 184 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 MS4A10Q96PG2 267 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 FYTTD1Q96QD9 318 aaKnown RBP13.06□□□□□ -0.32
RPL28-209ENST00000560055 P2RX4Q99571 388 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 TSC22D3Q99576 134 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 SRSF8Q9BRL6 282 aaKnown RBP13.06□□□□□ -0.32
RPL28-209ENST00000560055 CCDC32Q9BV29 185 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 TMEM14BQ9NUH8 114 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 NSG2Q9Y328 171 aa13.06□□□□□ -0.32
RPL28-209ENST00000560055 DBX1A6NMT0 343 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 C15orf61A6NNL5 157 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 NPIPB5A8MRT5 1133 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 TRGV3P03979 118 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 CRYGCP07315 174 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 BTCP35070 178 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 INPP1P49441 399 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 TPPP2P59282 170 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 SUPT4H1P63272 117 aaKnown RBP13.05□□□□□ -0.32
RPL28-209ENST00000560055 FHL3Q13643 280 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 TRIM16LQ309B1 348 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 DEFB136Q30KP8 78 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 H2BFWTQ7Z2G1 175 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 LINC00482Q8N8I6 264 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 LHFPL5Q8TAF8 219 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 C7orf50Q9BRJ6 194 aaKnown RBP13.05□□□□□ -0.32
RPL28-209ENST00000560055 QTRT1Q9BXR0 403 aaKnown RBP13.05□□□□□ -0.32
RPL28-209ENST00000560055 COMMD5Q9GZQ3 224 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 NDUFA4L2Q9NRX3 87 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 PRNDQ9UKY0 176 aa13.05□□□□□ -0.32
RPL28-209ENST00000560055 TRBV9A0A0B4J1U6 114 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 TEX50A0A1B0GTY4 177 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 IGLC7A0M8Q6 106 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 CCL24O00175 119 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 RBMXL2O75526 392 aaKnown RBP13.04□□□□□ -0.32
RPL28-209ENST00000560055 SNAPC5O75971 98 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 PF4P02776 101 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 AREGP15514 252 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 CTRB1P17538 263 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 MYCNOSP40205 109 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 CCR6P51684 374 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 DHODHQ02127 395 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 RBMS2Q15434 407 aaKnown RBP13.04□□□□□ -0.32
RPL28-209ENST00000560055 KLK9Q2XQG4 91 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 CTRB2Q6GPI1 263 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 SLC25A42Q86VD7 318 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 SGPP2Q8IWX5 399 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 MRPL41Q8IXM3 137 aaKnown RBP13.04□□□□□ -0.32
RPL28-209ENST00000560055 OR1L8Q8NGR8 309 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 OR5B3Q8NH48 314 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms