RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SLC35B1P78383 322 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 TPTE2P1Q5T6R2 138 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 ALKBH2Q6NS38 261 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 STPG3Q8N7X2 389 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 WDR31Q8NA23 367 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 PRR7Q8TB68 274 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 FAM122AQ96E09 287 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 YPEL2Q96QA6 119 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 TMEM140Q9NV12 185 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 DUSP13Q9UII6 198 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 TCF19Q9Y242 345 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 RNF114Q9Y508 228 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 AHRRA9YTQ3 701 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 SNURFLB1AK76 121 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 TNFSF15O95150 251 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 ADH4P08319 380 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 IRF2P14316 349 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 CD46P15529 392 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 ERVK-16P61578 105 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 BATFQ16520 125 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 SMIM21Q3B7S5 101 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 GMPPAQ96IJ6 420 aaPredicted RBP9.4□□□□□ -0.9
SRP54-213ENST00000556994 TRIB1Q96RU8 372 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 CDX2Q99626 313 aaPredicted RBP9.4□□□□□ -0.9
SRP54-213ENST00000556994 HINT2Q9BX68 163 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 NPVFQ9HCQ7 196 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 ICE1Q9Y2F5 2266 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 IGFBP2P18065 325 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 SELENOTP62341 195 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 HTD2P86397 168 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 KIAA1644Q3SXP7 199 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 OR8I2Q8N0Y5 310 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 ZNRF1Q8ND25 227 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 S1PR3Q99500 378 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 LRFN3Q9BTN0 628 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 SAMD10Q9BYL1 202 aa9.4□□□□□ -0.9
SRP54-213ENST00000556994 LGALS4P56470 323 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 TMEM164Q5U3C3 297 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 ASPHD1Q5U4P2 390 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 VWA1Q6PCB0 445 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 INO80CQ6PI98 192 aaPredicted RBP9.39□□□□□ -0.91
SRP54-213ENST00000556994 MIR17HGQ75NE6 70 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 OR5AU1Q8NGC0 362 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 EAF1Q96JC9 268 aaPredicted RBP9.39□□□□□ -0.91
SRP54-213ENST00000556994 LSM4Q9Y4Z0 139 aaKnown RBP9.39□□□□□ -0.91
SRP54-213ENST00000556994 CADP27708 2225 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 IGKV1D-17A0A075B6S4 117 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 PAFAH1B2P68402 229 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 FXYD3Q14802 87 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 AARDQ4LEZ3 155 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 SPRNQ5BIV9 151 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 TEPPQ6URK8 271 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 MOB3BQ86TA1 216 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 FAM90A1Q86YD7 464 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 DOLPP1Q86YN1 238 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 UBALD2Q8IYN6 164 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 ST6GALNAC3Q8NDV1 305 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 OR2Z1Q8NG97 314 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 TXNDC17Q9BRA2 123 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 RNASE7Q9H1E1 156 aaKnown RBP9.39□□□□□ -0.91
SRP54-213ENST00000556994 SVILO95425 2214 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 TNCP24821 2201 aa9.39□□□□□ -0.91
SRP54-213ENST00000556994 ZNF891A8MT65 544 aaPredicted RBP9.38□□□□□ -0.91
SRP54-213ENST00000556994 C21orf140B9A014 251 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 TNFSF13O75888 250 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 CA2P00918 260 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 CECR9P0C854 216 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
SRP54-213ENST00000556994 CRYBB3P26998 211 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 HOXC12P31275 282 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 TCL1AP56279 114 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 TMPRSS3P57727 454 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 RHOBP62745 196 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 RPEL1Q2QD12 228 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 TEX43Q6ZNM6 134 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 FAM216AQ8WUB2 273 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 TMEM68Q96MH6 324 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 ARRDC1-AS1Q9H2J1 176 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 IFI27L2Q9H2X8 130 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 V9GYV3 84 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 A8MXE2 369 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 IGKV3-15P01624 115 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 LOXL3P58215 753 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 KRTDAPP60985 99 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 PSG5Q15238 335 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 PQLC2Q6ZP29 291 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 Q6ZT83 130 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 FAM214BQ7L5A3 538 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 C1orf210Q8IVY1 113 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 OR52E5Q8NH55 327 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 UHRF2Q96PU4 802 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 MIEN1Q9BRT3 115 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 TMEM208Q9BTX3 173 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 VAMP8Q9BV40 100 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 OPN3Q9H1Y3 402 aaPredicted RBP9.38□□□□□ -0.91
SRP54-213ENST00000556994 GNB4Q9HAV0 340 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 FBXL7Q9UJT9 491 aa9.38□□□□□ -0.91
SRP54-213ENST00000556994 DCHS1Q96JQ0 3298 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 RPLP1P05386 114 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms