RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 LPCAT3Q6P1A2 487 aa10.19□□□□□ -0.78
CHFR-216ENST00000538235 UNQ5815/PRO19632Q6UWF5 114 aa10.19□□□□□ -0.78
CHFR-216ENST00000538235 ABHD5Q8WTS1 349 aa10.19□□□□□ -0.78
CHFR-216ENST00000538235 GNB4Q9HAV0 340 aa10.19□□□□□ -0.78
CHFR-216ENST00000538235 DMRT1Q9Y5R6 373 aa10.19□□□□□ -0.78
CHFR-216ENST00000538235 PRH1P02810 166 aa10.18□□□□□ -0.78
CHFR-216ENST00000538235 RPL23AP62750 156 aaKnown RBP10.18□□□□□ -0.78
CHFR-216ENST00000538235 TMEM187Q14656 261 aa10.18□□□□□ -0.78
CHFR-216ENST00000538235 DEFB136Q30KP8 78 aa10.18□□□□□ -0.78
CHFR-216ENST00000538235 Q6ZRM9 215 aa10.18□□□□□ -0.78
CHFR-216ENST00000538235 AKAP14Q86UN6 197 aa10.18□□□□□ -0.78
CHFR-216ENST00000538235 ZFAND1Q8TCF1 268 aa10.18□□□□□ -0.78
CHFR-216ENST00000538235 DUX3Q96PT4 197 aa10.18□□□□□ -0.78
CHFR-216ENST00000538235 FAM212BQ9NTI7 297 aaPredicted RBP10.18□□□□□ -0.78
CHFR-216ENST00000538235 COPZ2Q9P299 210 aa10.18□□□□□ -0.78
CHFR-216ENST00000538235 MGAM2Q2M2H8 2515 aa10.18□□□□□ -0.78
CHFR-216ENST00000538235 IGLC7A0M8Q6 106 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 MSGN1A6NI15 193 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 RGS13O14921 159 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 NDUFB6O95139 128 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 HRASP01112 189 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 VDAC1P21796 283 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 AP3S2P59780 193 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 FOXE3Q13461 319 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 ANKRD55Q3KP44 614 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 C8orf86Q6ZUL3 223 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 TMED4Q7Z7H5 227 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 NDUFA11Q86Y39 141 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 MMD2Q8IY49 270 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 OR5T1Q8NG75 326 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 OR10W1Q8NGF6 305 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 CCDC32Q9BV29 185 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 TMEM222Q9H0R3 208 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 ALX4Q9H161 411 aaPredicted RBP10.17□□□□□ -0.78
CHFR-216ENST00000538235 SCP2D1Q9UJQ7 156 aa10.17□□□□□ -0.78
CHFR-216ENST00000538235 C14orf166Q9Y224 244 aaKnown RBP10.17□□□□□ -0.78
CHFR-216ENST00000538235 FOXA2Q9Y261 457 aaPredicted RBP10.17□□□□□ -0.78
CHFR-216ENST00000538235 TCRBV4S1A1TA0A5B7 111 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 LYRM1O43325 122 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 REG1AP05451 166 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 HLA-GP17693 338 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 RPL27AP46776 148 aaKnown RBP10.16□□□□□ -0.78
CHFR-216ENST00000538235 RPL8P62917 257 aaKnown RBP10.16□□□□□ -0.78
CHFR-216ENST00000538235 DHODHQ02127 395 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 PPP1R1AQ13522 171 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 AKIRIN2Q53H80 203 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 PRR31Q5SQ13 230 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 SELENOHQ8IZQ5 122 aaKnown RBP10.16□□□□□ -0.78
CHFR-216ENST00000538235 TCTEX1D1Q8N7M0 179 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 CCDC71LQ8N9Z2 235 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 POC5Q8NA72 575 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 DMBX1Q8NFW5 382 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 OR4X2Q8NGF9 303 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 CD300LFQ8TDQ1 290 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 MS4A10Q96PG2 267 aa10.16□□□□□ -0.78
CHFR-216ENST00000538235 A0A0B4J293 547 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 TEX13DA0A0J9YY54 714 aaPredicted RBP10.15□□□□□ -0.78
CHFR-216ENST00000538235 TEX50A0A1B0GTY4 177 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 C15orf61A6NNL5 157 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 UPK1BO75841 260 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 CNIH1O95406 144 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 CDS2O95674 445 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 ELANEP08246 267 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 TRAPPC2P0DI81 140 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 TRAPPC2BP0DI82 140 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 PF4V1P10720 104 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 AKR1C4P17516 323 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 ANXA7P20073 488 aaKnown RBP10.15□□□□□ -0.78
CHFR-216ENST00000538235 FAUP35544 74 aaKnown RBP10.15□□□□□ -0.78
CHFR-216ENST00000538235 ECI1P42126 302 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 MFAP2P55001 183 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 WT1-ASQ06250 92 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 SPINK9Q5DT21 86 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 KHDC1LQ5JSQ8 128 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 TEX38Q6PEX7 206 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 ZNF491Q8N8L2 437 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 OR4A5Q8NH83 315 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 FAM110DQ8TAY7 271 aaPredicted RBP10.15□□□□□ -0.78
CHFR-216ENST00000538235 DEDD2Q8WXF8 326 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 GALNT14Q96FL9 552 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 FYTTD1Q96QD9 318 aaKnown RBP10.15□□□□□ -0.78
CHFR-216ENST00000538235 OR5B12Q96R08 314 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 QTRT1Q9BXR0 403 aaKnown RBP10.15□□□□□ -0.78
CHFR-216ENST00000538235 TMEM14BQ9NUH8 114 aa10.15□□□□□ -0.78
CHFR-216ENST00000538235 SLC6A1P30531 599 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 RAB9AP51151 201 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 SLC35B1P78383 322 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 RBMS2Q15434 407 aaKnown RBP10.14□□□□□ -0.79
CHFR-216ENST00000538235 TMEM268Q5VZI3 342 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 CADM3Q8N126 398 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 SLC35G3Q8N808 338 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 KLHL30-AS1Q8NEE0 82 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 VSTM2AQ8TAG5 236 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 GPR146Q96CH1 333 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 RAX2Q96IS3 184 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 TMEM56Q96MV1 263 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 FANCD2OSQ96PS1 177 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 TSSC4Q9Y5U2 329 aaPredicted RBP10.14□□□□□ -0.79
CHFR-216ENST00000538235 TMEM56-RWDD3S4R434 201 aa10.14□□□□□ -0.79
CHFR-216ENST00000538235 NAP1L6A6NFF2 107 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms