RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 PSMB3P49720 205 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 NDUFA6P56556 154 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 CD81P60033 236 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 RPL31P62899 125 aaKnown RBP11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 CYP2G1PQ6ZSU1 146 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 SLC25A48Q6ZT89 311 aaKnown RBP11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 DMRTC2Q8IXT2 367 aaPredicted RBP11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 ZNF383Q8NA42 475 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 OR10G9Q8NGN4 311 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 OR10G7Q8NGN6 311 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 RNASE6Q93091 150 aaKnown RBP11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 NPCDR1Q9BY65 106 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 OR51M1Q9H341 326 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 TMEM106BQ9NUM4 274 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 DOK5Q9P104 306 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 RAXQ9Y2V3 346 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 TRBV24-1A0A075B6N3 115 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 C15orf61A6NNL5 157 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 CD3EP07766 207 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 VDAC2P45880 294 aaPredicted RBP11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 HNF4GQ14541 408 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 FFAR4Q5NUL3 377 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 CCL17Q92583 94 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 GSN-AS1Q9NRJ2 163 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 TCF19Q9Y242 345 aa11.3□□□□□ -0.6
LDLRAD3-202ENST00000524419 TRAV3A0A0B4J244 114 aa11.29□□□□□ -0.6
LDLRAD3-202ENST00000524419 KBTBD11O94819 623 aa11.29□□□□□ -0.6
LDLRAD3-202ENST00000524419 HRASP01112 189 aa11.29□□□□□ -0.6
LDLRAD3-202ENST00000524419 S100PP25815 95 aa11.29□□□□□ -0.6
LDLRAD3-202ENST00000524419 RTL8BQ17RB0 113 aa11.29□□□□□ -0.6
LDLRAD3-202ENST00000524419 TMEM241Q24JQ0 296 aa11.29□□□□□ -0.6
LDLRAD3-202ENST00000524419 RHOVQ96L33 236 aa11.29□□□□□ -0.6
LDLRAD3-202ENST00000524419 SMIM7Q9BQ49 75 aa11.29□□□□□ -0.6
LDLRAD3-202ENST00000524419 SLC25A22Q9H936 323 aa11.29□□□□□ -0.6
LDLRAD3-202ENST00000524419 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
LDLRAD3-202ENST00000524419 FAM208BQ5VWN6 2430 aa11.29□□□□□ -0.6
LDLRAD3-202ENST00000524419 SEC14L6B5MCN3 397 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 NDUFB3O43676 98 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 SOX15O60248 233 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 HIST1H2BKO60814 126 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 YIF1AO95070 293 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 TRGC2P03986 189 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 HIST1H2BJP06899 126 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 HIST1H2BOP23527 126 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 HIST1H2BBP33778 126 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 HIST1H2BDP58876 126 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 HIST1H2BCP62807 126 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 HIST2H2BEQ16778 126 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 LRRC10Q5BKY1 277 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 NEUROG1Q92886 237 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 HIST1H2BHQ93079 126 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 ZNF714Q96N38 554 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 HIST1H2BNQ99877 126 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 HIST1H2BMQ99879 126 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 MS4A5Q9H3V2 200 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 ELOA3CA0A087WX78 387 aaPredicted RBP11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 CA7P43166 264 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 POU2AF1Q16633 256 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 H1FXQ92522 213 aaKnown RBP11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 GGACTQ9BVM4 153 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 ENY2Q9NPA8 101 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 SLC35D1Q9NTN3 355 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 TMEM14BQ9NUH8 114 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 WDR83OSQ9Y284 106 aa11.28□□□□□ -0.6
LDLRAD3-202ENST00000524419 CHD6Q8TD26 2715 aa11.27□□□□□ -0.6
LDLRAD3-202ENST00000524419 SMCO3A2RU48 225 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 IFITM10A6NMD0 228 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 FAM90A27PA6NNH2 459 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 CD1BP29016 333 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 S100A2P29034 98 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 APOBEC3AP31941 199 aaPredicted RBP11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 KLRB1Q12918 225 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 EFNB3Q15768 340 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 ACOT6Q3I5F7 207 aaPredicted RBP11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 GAR1Q9NY12 217 aaKnown RBP11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 B9A039 149 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 MPDU1O75352 247 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 CT45A6P0DMU7 189 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 CT45A5P0DMU8 189 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 CT45A7P0DMV0 189 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 CCL3L1P16619 93 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 HSPE1P61604 102 aaKnown RBP11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 TMEM249Q2WGJ8 235 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 TMEM200BQ69YZ2 307 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 ZNF833PQ6ZTB9 187 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 RAB24Q969Q5 203 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 MIOXQ9UGB7 285 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 PRNDQ9UKY0 176 aa11.27□□□□□ -0.61
LDLRAD3-202ENST00000524419 ROS1P08922 2347 aa11.26□□□□□ -0.61
LDLRAD3-202ENST00000524419 RRHO14718 337 aa11.26□□□□□ -0.61
LDLRAD3-202ENST00000524419 TNFRSF13BO14836 293 aaPredicted RBP11.26□□□□□ -0.61
LDLRAD3-202ENST00000524419 CHRNB4P30926 498 aa11.26□□□□□ -0.61
LDLRAD3-202ENST00000524419 ADIRFQ15847 76 aa11.26□□□□□ -0.61
LDLRAD3-202ENST00000524419 BSXQ3C1V8 233 aa11.26□□□□□ -0.61
LDLRAD3-202ENST00000524419 LYPD2Q6UXB3 125 aa11.26□□□□□ -0.61
LDLRAD3-202ENST00000524419 SPNS3Q6ZMD2 512 aa11.26□□□□□ -0.61
LDLRAD3-202ENST00000524419 ST6GALNAC3Q8NDV1 305 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms