RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SGPP2Q8IWX5 399 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 LINC00528Q8N1L1 170 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 CENPSQ8N2Z9 138 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 TEX45Q8NA69 505 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 TMEM167AQ8TBQ9 72 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 CD300LFQ8TDQ1 290 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 WIPF2Q8TF74 440 aaPredicted RBP7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 SRSF12Q8WXF0 261 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 DEDD2Q8WXF8 326 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 OR2A7Q96R45 310 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 C7orf50Q9BRJ6 194 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 C20orf85Q9H1P6 137 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 TRAV41A0A0B4J266 112 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 A0A1B0GW64 132 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 A0A1W2PN81 502 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 A0A1W2PRX2 142 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 HMX3A6NHT5 357 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 DBX1A6NMT0 343 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 E7EUB6 86 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 UPK2O00526 184 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 UCP1P25874 307 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 CHRNA7P36544 502 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 AKR1C2P52895 323 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 RAB25P57735 213 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 CFHR3Q02985 330 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 ASAH1Q13510 395 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 TMEM187Q14656 261 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 POU2AF1Q16633 256 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 TCTEX1D4Q5JR98 221 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 TMEM268Q5VZI3 342 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 UNQ5815/PRO19632Q6UWF5 114 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 MMD2Q8IY49 270 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 LFNGQ8NES3 379 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 OR5AU1Q8NGC0 362 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 GLYATL2Q8WU03 294 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 SEC22AQ96IW7 307 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 SCGB3A2Q96PL1 93 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 FYTTD1Q96QD9 318 aaKnown RBP7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 TSC22D3Q99576 134 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 PHB2Q99623 299 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 CITED2Q99967 270 aaPredicted RBP7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 SLC25A21Q9BQT8 299 aaPredicted RBP7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 ZNF747Q9BV97 191 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 BET1LQ9NYM9 111 aa7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 TET2Q6N021 2002 aaPredicted RBP7.69□□□□□ -1.18
TOPBP1-209ENST00000513818 FAM240BA0A1B0GVZ2 78 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 SOX15O60248 233 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 ACTL6BO94805 426 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 NXPH3O95157 252 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 IGF1P05019 195 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 HLA-GP17693 338 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 RPL27AP46776 148 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 UBE2MP61081 183 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 RPL8P62917 257 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 TNP2Q05952 138 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 C19orf54Q5BKX5 351 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 SPINK9Q5DT21 86 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 ASPHD1Q5U4P2 390 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 ZNF562Q6V9R5 426 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 C18orf65Q6ZTR6 163 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 SELENOHQ8IZQ5 122 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 TCTEX1D1Q8N7M0 179 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 SLC35G3Q8N808 338 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 OR52B4Q8NGK2 314 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 RNASE11Q8TAA1 199 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 VSTM2AQ8TAG5 236 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 ENKURQ8TC29 256 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 TMEM222Q9H0R3 208 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 NUDT15Q9NV35 164 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 TNCP24821 2201 aa7.68□□□□□ -1.18
TOPBP1-209ENST00000513818 MSGN1A6NI15 193 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 CGB1A6NKQ9 187 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 CREBL2O60519 120 aaPredicted RBP7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 PRH1P02810 166 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 TCRBP04435 133 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 REG1AP05451 166 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 IL6RP08887 468 aaPredicted RBP7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 AREGP15514 252 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 SPNP16150 400 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 SLC6A1P30531 599 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 SLC35B1P78383 322 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 NSUN5P1Q3KNT7 163 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 ANKRD55Q3KP44 614 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 H2BFWTQ7Z2G1 175 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 NRARPQ7Z6K4 114 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 SLC25A42Q86VD7 318 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 ZNF695Q8IW36 515 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 MRPL41Q8IXM3 137 aaKnown RBP7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 OR5T1Q8NG75 326 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 SGMS2Q8NHU3 365 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 CHPT1Q8WUD6 406 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 RBPMSQ93062 196 aaKnown RBP7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 GALNT14Q96FL9 552 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 MS4A10Q96PG2 267 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 CITED1Q99966 193 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 HINT2Q9BX68 163 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 QTRT1Q9BXR0 403 aaKnown RBP7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 KLK15Q9H2R5 256 aa7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 FAM212BQ9NTI7 297 aaPredicted RBP7.67□□□□□ -1.18
TOPBP1-209ENST00000513818 FOXA2Q9Y261 457 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms