RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 VSTM5A8MXK1 200 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 TRAPPC2LH3BP13 241 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 SYNGR2O43760 224 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 ESDP10768 282 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 F2RP25116 425 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 APOBEC3AP31941 199 aaPredicted RBP11.35□□□□□ -0.59
COPS7B-221ENST00000488111 RAB7AP51149 207 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 COTL1Q14019 142 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 TESK1Q15569 626 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 SAPCD1Q5SSQ6 148 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 CST9LP1Q5W188 147 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 C11orf53Q8IXP5 236 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 MKXQ8IYA7 352 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 OR4F5Q8NH21 305 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 OR2V2Q96R30 315 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 OR4C12Q96R67 309 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 OR4F4Q96R69 305 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 CTXND1A0A1B0GTU2 59 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 J3QT63 122 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 IGHV1-46P01743 117 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 SCTP09683 121 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 TPPP2P59282 170 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 ZNF672Q499Z4 452 aaPredicted RBP11.35□□□□□ -0.59
COPS7B-221ENST00000488111 Q6ZRM9 215 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 C11orf42Q8N5U0 333 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 ITLN1Q8WWA0 313 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 NEIL1Q96FI4 390 aaPredicted RBP11.35□□□□□ -0.59
COPS7B-221ENST00000488111 TMEM204Q9BSN7 226 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 MYO18BQ8IUG5 2567 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 OR7C1O76099 320 aaPredicted RBP11.34□□□□□ -0.59
COPS7B-221ENST00000488111 NAPSAO96009 420 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 IAPPP10997 89 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 IGFBP2P18065 325 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 CHRNA7P36544 502 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 SELENOTP62341 195 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 RBX1P62877 108 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 FOXL1Q12952 345 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 BATFQ16520 125 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 VAMP8Q9BV40 100 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 PKIBQ9C010 78 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 TP53TG3Q9ULZ0 132 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 USP9XQ93008 2570 aaPredicted RBP11.34□□□□□ -0.59
COPS7B-221ENST00000488111 A0A1W2PPR1 153 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 WNT2P09544 360 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 LINC00310P59036 64 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 YPEL3P61236 119 aaPredicted RBP11.34□□□□□ -0.59
COPS7B-221ENST00000488111 CCL8P80075 99 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 ACSM6Q6P461 480 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 GATAD1Q8WUU5 269 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 PAM16Q9Y3D7 125 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 ABCA4P78363 2273 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 PKDREJQ9NTG1 2253 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 FAM208BQ5VWN6 2430 aa11.34□□□□□ -0.59
COPS7B-221ENST00000488111 IGKV1-6A0A0C4DH72 117 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A10PA6NDY2 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A18PA6NE21 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A16PA6NEW6 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A20PA6NIJ5 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A8PA6NJQ4 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A7PA6NKC0 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A22PA8MWA6 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A12PA8MX19 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A5PA8MXJ8 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A23PA8MXZ1 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 HS3ST1O14792 307 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A15PP0C7V4 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A13PP0C7W8 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A14PP0C7W9 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM90A24PP0C7X0 464 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 CD33P20138 364 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 ADMP35318 185 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 TFPI2P48307 235 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 TNFAIP6P98066 277 aaPredicted RBP11.33□□□□□ -0.6
COPS7B-221ENST00000488111 MOGAT3Q86VF5 341 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 SAXO1Q8IYX7 474 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 MUC15Q8N387 334 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 FAM222BQ8WU58 562 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 LSM10Q969L4 123 aaKnown RBP11.33□□□□□ -0.6
COPS7B-221ENST00000488111 GAL3ST2Q9H3Q3 398 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 C17orf100A8MU93 164 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 WNT9BO14905 357 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 CTXN2P0C2S0 81 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 NPPCP23582 126 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 IZUMO4Q1ZYL8 232 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 WDR82Q6UXN9 313 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 LINC01551Q86U37 167 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 Q8NFD4 153 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 SLC35E1Q96K37 410 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 SLC25A22Q9H936 323 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 DYNLRB1Q9NP97 96 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 CACNG5Q9UF02 275 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 POLDIP2Q9Y2S7 368 aa11.33□□□□□ -0.6
COPS7B-221ENST00000488111 SPTAN1Q13813 2472 aaKnown RBP11.32□□□□□ -0.6
COPS7B-221ENST00000488111 UBE2L5PA0A1B0GUS4 154 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 A1L4Q6 167 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 ITGB1BP1O14713 200 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 TMPRSS2O15393 492 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 PSG2P11465 335 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 CDKN1AP38936 164 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 COMPP49747 757 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms