RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 IFNA10P01566 189 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 IGKV1-16P04430 117 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 IL6RP08887 468 aaPredicted RBP5.7□□□□□ -1.5
SF3A3-206ENST00000487062 NMBP08949 121 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 OR8U8P0C7N1 319 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 METTL15P1P0C7V9 234 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 SAA1P0DJI8 122 aaPredicted RBP5.7□□□□□ -1.5
SF3A3-206ENST00000487062 M6PRP20645 277 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 CD1BP29016 333 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 ATP5IP56385 69 aaPredicted RBP5.7□□□□□ -1.5
SF3A3-206ENST00000487062 RAB11AP62491 216 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 BLOC1S1P78537 153 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 PAX2Q02962 417 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 SLC38A11Q08AI6 406 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 DIAPH2-AS1Q14236 149 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 CCDC144NLQ6NUI1 221 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 TMEM14EPQ6UXP3 125 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 C8orf86Q6ZUL3 223 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 TMEM217Q8N7C4 229 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 TEX45Q8NA69 505 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 OR10P1Q8NGE3 313 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 OR5B3Q8NH48 314 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 TMEM167AQ8TBQ9 72 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 SCGB1C1Q8TD33 95 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 BSCL2Q96G97 398 aaPredicted RBP5.7□□□□□ -1.5
SF3A3-206ENST00000487062 COMMD5Q9GZQ3 224 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 LPAR2Q9HBW0 351 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 WFDC1Q9HC57 220 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 MED9Q9NWA0 146 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 TBL2Q9Y4P3 447 aaKnown RBP5.7□□□□□ -1.5
SF3A3-206ENST00000487062 OR51B2Q9Y5P1 312 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 ARHGAP32A7KAX9 2087 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 ZNF462Q96JM2 2506 aa5.7□□□□□ -1.5
SF3A3-206ENST00000487062 IGHV3-72A0A0B4J1Y9 119 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 IGHV4-61A0A0C4DH41 118 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 TEX50A0A1B0GTY4 177 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 A0A1W2PN81 502 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 SRRM4A7MD48 611 aaKnown RBP5.69□□□□□ -1.5
SF3A3-206ENST00000487062 FGF16O43320 207 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 SPP1P10451 314 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 HOXB4P17483 251 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-206ENST00000487062 MAS1LP35410 378 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 CHRNA7P36544 502 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 VDAC2P45880 294 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-206ENST00000487062 SULT1A2P50226 295 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 RAB5CP51148 216 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 UBE2E1P51965 193 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 F2RL1P55085 397 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 DLX1P56177 255 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 RPL8P62917 257 aaKnown RBP5.69□□□□□ -1.5
SF3A3-206ENST00000487062 PRCDQ00LT1 54 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 KLRD1Q13241 179 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 CLEC12BQ2HXU8 276 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 SPINK9Q5DT21 86 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 FAM74A1Q5RGS3 127 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 OR8G2PQ6IF36 304 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 HCP5Q6MZN7 132 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 MMD2Q8IY49 270 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 HSD17B11Q8NBQ5 300 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 OR1L8Q8NGR8 309 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 PCNPQ8WW12 178 aaKnown RBP5.69□□□□□ -1.5
SF3A3-206ENST00000487062 SAT2Q96F10 170 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-206ENST00000487062 OR4C12Q96R67 309 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 TMEM147Q9BVK8 224 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 HINT2Q9BX68 163 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 PARD6GQ9BYG4 376 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-206ENST00000487062 PLEKHA3Q9HB20 300 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 MMP26Q9NRE1 261 aa5.69□□□□□ -1.5
SF3A3-206ENST00000487062 BEX4Q9NWD9 120 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-206ENST00000487062 DCHS2Q6V1P9 2916 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 FLNCQ14315 2725 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 KMT2BQ9UMN6 2715 aaPredicted RBP5.68□□□□□ -1.5
SF3A3-206ENST00000487062 IGHV4-30-2A0A087WSY4 118 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 A0A1W2PPI3 338 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 C15orf62A8K5M9 175 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 ZNF705EA8MWA4 302 aaPredicted RBP5.68□□□□□ -1.5
SF3A3-206ENST00000487062 NUDT19A8MXV4 375 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 UMAD1C9J7I0 102 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 FAM157AC9JC47 383 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 RNASEK-C17orf49H0YIS7 233 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 TIMM23O14925 209 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 SLC25A17O43808 307 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 ACTL6BO94805 426 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 IGLV2-23P01705 113 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 NPY1RP25929 384 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 ATP6V0CP27449 155 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 SNCAP37840 140 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 ERHP84090 104 aaKnown RBP5.68□□□□□ -1.5
SF3A3-206ENST00000487062 PRB3Q04118 309 aaPredicted RBP5.68□□□□□ -1.5
SF3A3-206ENST00000487062 COMMD7Q86VX2 200 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 LRRC75A-AS1Q8N1F1 130 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 SLC24A4Q8NFF2 622 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 OR2G3Q8NGZ4 309 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 MALSU1Q96EH3 234 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 TBX15Q96SF7 602 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 UQCC1Q9NVA1 299 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 KIAA1456Q9P272 454 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 HILPDAQ9Y5L2 63 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 AUP1Q9Y679 476 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 MYO18BQ8IUG5 2567 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms