RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 ZNF343Q6P1L6 599 aa7.05□□□□□ -1.28
SYN3-211ENST00000472027 TBC1D26Q86UD7 250 aa7.05□□□□□ -1.28
SYN3-211ENST00000472027 LHFPL1Q86WI0 220 aa7.05□□□□□ -1.28
SYN3-211ENST00000472027 ARRDC1Q8N5I2 433 aa7.05□□□□□ -1.28
SYN3-211ENST00000472027 OR4D10Q8NGI6 311 aa7.05□□□□□ -1.28
SYN3-211ENST00000472027 MCFD2Q8NI22 146 aa7.05□□□□□ -1.28
SYN3-211ENST00000472027 NXF2Q9GZY0 626 aaKnown RBP7.05□□□□□ -1.28
SYN3-211ENST00000472027 SLC2A9Q9NRM0 540 aa7.05□□□□□ -1.28
SYN3-211ENST00000472027 TMEM140Q9NV12 185 aa7.05□□□□□ -1.28
SYN3-211ENST00000472027 RABL2AQ9UBK7 228 aaPredicted RBP7.05□□□□□ -1.28
SYN3-211ENST00000472027 PEF1Q9UBV8 284 aaKnown RBP7.05□□□□□ -1.28
SYN3-211ENST00000472027 ZMAT5Q9UDW3 170 aaKnown RBP7.05□□□□□ -1.28
SYN3-211ENST00000472027 RABL2BQ9UNT1 228 aa7.05□□□□□ -1.28
SYN3-211ENST00000472027 BOLA1Q9Y3E2 137 aa7.05□□□□□ -1.28
SYN3-211ENST00000472027 DPPA5A6NC42 116 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 FABP12A6NFH5 140 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 FAM223BA6NKX1 122 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 MARCH11A6NNE9 402 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 NPIPB5A8MRT5 1133 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 K7EIL1 84 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 RAB3DO95716 219 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 CRYGCP07315 174 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 PGAM2P15259 253 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 AREGP15514 252 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 PSMB6P28072 239 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 G6PCP35575 357 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 INSL3P51460 131 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 ERVK-16P61578 105 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 RHOGP84095 191 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 SSBP1Q04837 148 aaKnown RBP7.04□□□□□ -1.28
SYN3-211ENST00000472027 ATP5G2Q06055 141 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 FAM223AQ8IWN6 122 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 CADM3Q8N126 398 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 TERB2Q8NHR7 220 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 SMIM4Q8WVI0 70 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 SOSTQ9BQB4 213 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 COMMD5Q9GZQ3 224 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 AKIP1Q9NQ31 210 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 FAM212BQ9NTI7 297 aaPredicted RBP7.04□□□□□ -1.28
SYN3-211ENST00000472027 ZNF257Q9Y2Q1 563 aa7.04□□□□□ -1.28
SYN3-211ENST00000472027 TEX50A0A1B0GTY4 177 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 GSTZ1O43708 216 aaPredicted RBP7.03□□□□□ -1.28
SYN3-211ENST00000472027 OR2J3O76001 311 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 TRBV12-3P01733 135 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 REG1AP05451 166 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 FGF2P09038 288 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 CTRB1P17538 263 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 PI3P19957 117 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 ZP3P21754 424 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 PTBP1P26599 531 aaKnown RBP eCLIP7.03□□□□□ -1.28
SYN3-211ENST00000472027 ECI1P42126 302 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 OR2B8PP59922 312 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 RND3P61587 244 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 SCGB2B2Q4G0G5 96 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 DEFB121Q5J5C9 76 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 CTRB2Q6GPI1 263 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 FAAP20Q6NZ36 180 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 ACSM6Q6P461 480 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 C19orf35Q6ZS72 473 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 ZNF429Q86V71 674 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 NECAP1Q8NC96 275 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 ZNF486Q96H40 463 aaPredicted RBP7.03□□□□□ -1.28
SYN3-211ENST00000472027 FANCD2OSQ96PS1 177 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 RBM38Q9H0Z9 239 aaKnown RBP7.03□□□□□ -1.28
SYN3-211ENST00000472027 RSL24D1Q9UHA3 163 aaKnown RBP7.03□□□□□ -1.28
SYN3-211ENST00000472027 NSG2Q9Y328 171 aa7.03□□□□□ -1.28
SYN3-211ENST00000472027 MEGF8Q7Z7M0 2845 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.02□□□□□ -1.29
SYN3-211ENST00000472027 DISC1C4P0D8 188 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 SAP30O75446 220 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 SNAPC5O75971 98 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 NDUFB8O95169 186 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 DHFRP00374 187 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 IGKV1-39P01597 117 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 IGKV1D-39P04432 117 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 AKAIN1P0CW23 69 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 TRAPPC2P0DI81 140 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 TRAPPC2BP0DI82 140 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 DEFA4P12838 97 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 PPP5CP53041 499 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 PIGPP57054 158 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 KLF5Q13887 457 aaPredicted RBP7.02□□□□□ -1.29
SYN3-211ENST00000472027 MEF2DQ14814 521 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 KLK9Q2XQG4 91 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 C15orf32Q32M92 178 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 OR10W1Q8NGF6 305 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 OR1L8Q8NGR8 309 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 ZFAND1Q8TCF1 268 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 MARCH1Q8TCQ1 289 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 MRGPRFQ96AM1 343 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 SRSF8Q9BRL6 282 aaKnown RBP7.02□□□□□ -1.29
SYN3-211ENST00000472027 QTRT1Q9BXR0 403 aaKnown RBP7.02□□□□□ -1.29
SYN3-211ENST00000472027 FBXL7Q9UJT9 491 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 KLK9Q9UKQ9 250 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 OR51B2Q9Y5P1 312 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 DNAH3Q8TD57 4116 aa7.02□□□□□ -1.29
SYN3-211ENST00000472027 C3orf85A0A1B0GTC6 90 aa7.01□□□□□ -1.29
SYN3-211ENST00000472027 IGLC7A0M8Q6 106 aa7.01□□□□□ -1.29
SYN3-211ENST00000472027 ANKRD20A5PA0PJZ0 165 aa7.01□□□□□ -1.29
SYN3-211ENST00000472027 ZNF701M0R085 212 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms