RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 NDUFB4O95168 129 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 GOSR1O95249 250 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 SPP1P10451 314 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 RPL30P62888 115 aaKnown RBP9.31□□□□□ -0.92
IFT140-202ENST00000397417 DLK1P80370 383 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 TFF3Q07654 80 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 HMGN3Q15651 99 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 FAM89BQ8N5H3 189 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 CD177Q8N6Q3 437 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 TAF15Q92804 592 aaKnown RBP eCLIP9.31□□□□□ -0.92
IFT140-202ENST00000397417 RNF126Q9BV68 326 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 GP6Q9HCN6 339 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 DBX1A6NMT0 343 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 H3BQ15 152 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 PAX5Q02548 391 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 DHRS7BQ6IAN0 325 aaPredicted RBP9.31□□□□□ -0.92
IFT140-202ENST00000397417 LYPD2Q6UXB3 125 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 SAA2-SAA4A0A096LPE2 208 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 SLC31A2O15432 143 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 NDUFS7O75251 213 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 SAA2P0DJI9 122 aaPredicted RBP9.31□□□□□ -0.92
IFT140-202ENST00000397417 OTX1P32242 354 aaPredicted RBP9.31□□□□□ -0.92
IFT140-202ENST00000397417 CNN1P51911 297 aaKnown RBP9.31□□□□□ -0.92
IFT140-202ENST00000397417 GCSAMLQ5JQS6 135 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 RABAC1Q9UI14 185 aa9.31□□□□□ -0.92
IFT140-202ENST00000397417 ZNF137PP52743 207 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 SLC35E4Q6ICL7 350 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 UNQ5815/PRO19632Q6UWF5 114 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 SLC35E3Q7Z769 313 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 SAXO1Q8IYX7 474 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 OR10W1Q8NGF6 305 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 SEC11CQ9BY50 192 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 CFPP27918 469 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 TCTAP57738 103 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM3BP58499 235 aaPredicted RBP9.3□□□□□ -0.92
IFT140-202ENST00000397417 H1FOOQ8IZA3 346 aaPredicted RBP9.3□□□□□ -0.92
IFT140-202ENST00000397417 ZNF596Q8TC21 504 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 RYDENQ9NUL5 291 aaKnown RBP9.3□□□□□ -0.92
IFT140-202ENST00000397417 FKBP11Q9NYL4 201 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A10PA6NDY2 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A18PA6NE21 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A16PA6NEW6 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A20PA6NIJ5 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A8PA6NJQ4 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A7PA6NKC0 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A22PA8MWA6 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A12PA8MX19 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A5PA8MXJ8 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A23PA8MXZ1 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 K7EQM0 130 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 SRSF10O75494 262 aaKnown RBP9.3□□□□□ -0.92
IFT140-202ENST00000397417 CA2P00918 260 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 TGFAP01135 160 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 IGKV1D-33P01593 117 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 IGKV1-33P01594 117 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A15PP0C7V4 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A13PP0C7W8 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A14PP0C7W9 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 FAM90A24PP0C7X0 464 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 GNG4P50150 75 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 SRSF3P84103 164 aaKnown RBP9.3□□□□□ -0.92
IFT140-202ENST00000397417 BSXQ3C1V8 233 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 OR9G1Q8NH87 305 aa9.3□□□□□ -0.92
IFT140-202ENST00000397417 NEIL1Q96FI4 390 aaPredicted RBP9.3□□□□□ -0.92
IFT140-202ENST00000397417 LYRM2Q9NU23 88 aaPredicted RBP9.3□□□□□ -0.92
IFT140-202ENST00000397417 AMMECR1Q9Y4X0 333 aaPredicted RBP9.3□□□□□ -0.92
IFT140-202ENST00000397417 CHEK1O14757 476 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 KBTBD11O94819 623 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 PMCHP20382 165 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 UQCRFS1P47985 274 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 HSPE1P61604 102 aaKnown RBP9.29□□□□□ -0.92
IFT140-202ENST00000397417 PRRC2AP48634 2157 aaKnown RBP9.29□□□□□ -0.92
IFT140-202ENST00000397417 TRAV3A0A0B4J244 114 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 MUC21A0A0G2JKD1 596 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 MUC21A0A140T8X8 626 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 KBTBD11-OT1A0A1B0GTJ5 212 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 IGHV3-11P01762 117 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 CRYBA1P05813 215 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 S100A4P26447 101 aaKnown RBP9.29□□□□□ -0.92
IFT140-202ENST00000397417 CD81P60033 236 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 KLF17Q5JT82 389 aaPredicted RBP9.29□□□□□ -0.92
IFT140-202ENST00000397417 MUC21Q5SSG8 566 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 LEMD1Q68G75 181 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 OR4A47Q6IF82 309 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 Q6ZR03 302 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 C1orf162Q8NEQ5 155 aaPredicted RBP9.29□□□□□ -0.92
IFT140-202ENST00000397417 LIME1Q9H400 295 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 NPVFQ9HCQ7 196 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 NAT8BQ9UHF3 227 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 WASHC3Q9Y3C0 194 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 FAM215AQ9Y5M1 114 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 TRBV6-7A0A0A0MS04 114 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 TRBV23-1A0A0A0MS06 115 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 SFTPCP11686 197 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 ARL16Q0P5N6 197 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 ZNF788Q6ZQV5 615 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 PIP4P1Q86T03 277 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 ZNF561Q8N587 486 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 OR5AU1Q8NGC0 362 aa9.29□□□□□ -0.92
IFT140-202ENST00000397417 CCL19Q99731 98 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms