RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 ZNF430Q9H8G1 570 aaPredicted RBP8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 TMEM140Q9NV12 185 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 NUDT15Q9NV35 164 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 BET1LQ9NYM9 111 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 KCNIP3Q9Y2W7 256 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 FBXO7Q9Y3I1 522 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 TNCP24821 2201 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 A0A0G2JRQ6 117 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 C9orf170A2RU37 121 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 CLPSL1A2RUU4 121 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 UPK2O00526 184 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 ATP6V0E1O15342 81 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 B3GALNT1O75752 331 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 IGKV1-5P01602 117 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 H2AFB2P0C5Z0 115 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 OR4E1P0C645 316 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 OR9G9P0C7N8 305 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 EGR2P11161 476 aaPredicted RBP8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 MYOD1P15172 320 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 VAMP1P23763 118 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 RAB25P57735 213 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 ERVK-16P61578 105 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 GNB1P62873 340 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 IZUMO4Q1ZYL8 232 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 ANKRD55Q3KP44 614 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 AWAT1Q58HT5 328 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 ARSJQ5FYB0 599 aaPredicted RBP8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 ZNF562Q6V9R5 426 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 OR52B4Q8NGK2 314 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 TMEM167AQ8TBQ9 72 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 CASTOR1Q8WTX7 329 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 TMEM56Q96MV1 263 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 AIFM2Q9BRQ8 373 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 FAM103A1Q9BTL3 118 aaKnown RBP8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 OR51J1Q9H342 316 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 NSG2Q9Y328 171 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 RNF114Q9Y508 228 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 MMP24Q9Y5R2 645 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 NUBP2Q9Y5Y2 271 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 TMEM56-RWDD3S4R434 201 aa8.44□□□□□ -1.06
SMARCA4-213ENST00000587988 FBN1P35555 2871 aaKnown RBP8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 E7EUB6 86 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 HAX1O00165 279 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 P0C879 139 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 MECP2P51608 486 aaKnown RBP8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 PROK1P58294 105 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 KRTAP10-3P60369 221 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 UBE2MP61081 183 aaKnown RBP8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 FOXL1Q12952 345 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 DHRS2Q13268 280 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 DCTN2Q13561 401 aaKnown RBP8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 FXYD3Q14802 87 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 TNXAQ16473 311 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 C10orf55Q5SWW7 151 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 TMEM268Q5VZI3 342 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 C10orf99Q6UWK7 81 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 H2BFWTQ7Z2G1 175 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 ZNF695Q8IW36 515 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 MMD2Q8IY49 270 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 OR4A5Q8NH83 315 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 VSTM2AQ8TAG5 236 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 RBPMSQ93062 196 aaKnown RBP8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 WNT10AQ9GZT5 417 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 ALX4Q9H161 411 aaPredicted RBP8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 PALMDQ9NP74 551 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 PARP11Q9NR21 331 aa8.43□□□□□ -1.06
SMARCA4-213ENST00000587988 TET2Q6N021 2002 aaPredicted RBP8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 A0A1B0GW64 132 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 CGB1A6NKQ9 187 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 DBX1A6NMT0 343 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 G3V318 75 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 KCNAB3O43448 404 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 CNIH1O95406 144 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 HLA-AP01891 365 aaKnown RBP8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 OPN1MWP04001 364 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 IGF1P05019 195 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 OPN1MW2P0DN77 364 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 OPN1MW3P0DN78 364 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 ANXA3P12429 323 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 COMPP49747 757 aaPredicted RBP8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 AKR1C2P52895 323 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 OR2B8PP59922 312 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 RPL8P62917 257 aaKnown RBP8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 C4orf46Q504U0 113 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 HIST2H2BDQ6DRA6 164 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 Q6ZRM9 215 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 LYZL2Q7Z4W2 148 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 LYG2Q86SG7 212 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 FOXRED2Q8IWF2 684 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 CADM3Q8N126 398 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 STPG2Q8N412 459 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 KLHDC1Q8N7A1 406 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 SLC35G3Q8N808 338 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 GRPEL2Q8TAA5 225 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 ARPC1AQ92747 370 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 GPR146Q96CH1 333 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 SEC22CQ9BRL7 303 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 WSB1Q9Y6I7 421 aa8.42□□□□□ -1.06
SMARCA4-213ENST00000587988 A0A0B4J293 547 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 A0A1B0GUS0 222 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms