RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ELANEP08246 267 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 HLA-GP17693 338 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 CD33P20138 364 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 CNTFRP26992 372 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 ECI1P42126 302 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 BEAN1Q3B7T3 259 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 PDLIM3Q53GG5 364 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-211ENST00000554310 CXorf66Q5JRM2 361 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-211ENST00000554310 LPCAT3Q6P1A2 487 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 H1FOOQ8IZA3 346 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-211ENST00000554310 RNF152Q8N8N0 203 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 WFDC9Q8NEX5 89 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 GRPEL2Q8TAA5 225 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 ST6GALNAC5Q9BVH7 336 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 GPR132Q9UNW8 380 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 GAB2Q9UQC2 676 aa10.26□□□□□ -0.77
SHMT2-211ENST00000554310 TGP01266 2768 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 IGKV1D-8A0A087WSZ0 117 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 IGHV7-81A0A0B4J1V7 117 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 NUDT19A8MXV4 375 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 M0R1X1 148 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 GOSR2O14653 212 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 ATP6V0E1O15342 81 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 SLC22A5O76082 557 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 IGHG4P01861 327 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 CTXN2P0C2S0 81 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 OR8U9P0C7N5 309 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 TSPAN5P62079 268 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 SURF2Q15527 256 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-211ENST00000554310 LIN54Q6MZP7 749 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 OVCH2Q7RTZ1 564 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 ZNF383Q8NA42 475 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 KLHL30-AS1Q8NEE0 82 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 OR8U1Q8NH10 309 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 MARCH1Q8TCQ1 289 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 TSNAXQ99598 290 aaKnown RBP10.25□□□□□ -0.77
SHMT2-211ENST00000554310 PARP11Q9NR21 331 aa10.25□□□□□ -0.77
SHMT2-211ENST00000554310 A0A0B4J2A0 478 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 C9orf170A2RU37 121 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 HLA-AP01891 365 aaKnown RBP10.24□□□□□ -0.77
SHMT2-211ENST00000554310 IGKV1-16P04430 117 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 C4BPBP20851 252 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 H2BFSP57053 126 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 TAGLNQ01995 201 aaKnown RBP10.24□□□□□ -0.77
SHMT2-211ENST00000554310 PPP1R1AQ13522 171 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 PLGLAQ15195 96 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 LGALSLQ3ZCW2 172 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-211ENST00000554310 TMEM128Q5BJH2 165 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 ETV3LQ6ZN32 361 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 ZNF695Q8IW36 515 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 MITD1Q8WV92 249 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 RCC1LQ96I51 464 aaKnown RBP10.24□□□□□ -0.77
SHMT2-211ENST00000554310 FBXL15Q9H469 300 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 SDHAF2Q9NX18 166 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 EHFQ9NZC4 300 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 SHPKQ9UHJ6 478 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 ANXA10Q9UJ72 324 aa10.24□□□□□ -0.77
SHMT2-211ENST00000554310 RBM7Q9Y580 266 aaKnown RBP10.24□□□□□ -0.77
SHMT2-211ENST00000554310 PRKDCP78527 4128 aaKnown RBP10.23□□□□□ -0.77
SHMT2-211ENST00000554310 TRAV41A0A0B4J266 112 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 HMSDA8MTL9 139 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 DUS4LO95620 317 aaKnown RBP10.23□□□□□ -0.77
SHMT2-211ENST00000554310 RPLP1P05386 114 aaKnown RBP10.23□□□□□ -0.77
SHMT2-211ENST00000554310 PSMB8P28062 276 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 THBS3P49746 956 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 CRIP2P52943 208 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-211ENST00000554310 ARPC4P59998 168 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 AADACL3Q5VUY0 350 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 ZNF660Q6AZW8 331 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-211ENST00000554310 C8orf86Q6ZUL3 223 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 ZNF767PQ75MW2 155 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 TCTEX1D1Q8N7M0 179 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 LINC00482Q8N8I6 264 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 UXS1Q8NBZ7 420 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 ADAD2Q8NCV1 583 aaKnown RBP10.23□□□□□ -0.77
SHMT2-211ENST00000554310 OR5M8Q8NGP6 311 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 FLYWCH2Q96CP2 140 aaKnown RBP10.23□□□□□ -0.77
SHMT2-211ENST00000554310 ADTRPQ96IZ2 230 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 FAM210AQ96ND0 272 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 PHB2Q99623 299 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 SLC35D1Q9NTN3 355 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 METTL1Q9UBP6 276 aaKnown RBP10.23□□□□□ -0.77
SHMT2-211ENST00000554310 OR2W1Q9Y3N9 320 aa10.23□□□□□ -0.77
SHMT2-211ENST00000554310 SIX6O95475 246 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 PPIFP30405 207 aaKnown RBP10.22□□□□□ -0.77
SHMT2-211ENST00000554310 MYCNOSP40205 109 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 CDX1P47902 265 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-211ENST00000554310 RPS16P62249 146 aaKnown RBP10.22□□□□□ -0.77
SHMT2-211ENST00000554310 CX3CL1P78423 397 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 NDPQ00604 133 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 PSG5Q15238 335 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 RTL8BQ17RB0 113 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 OXLD1Q5BKU9 147 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 C18orf65Q6ZTR6 163 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 REC114Q7Z4M0 266 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 MRPL41Q8IXM3 137 aaKnown RBP10.22□□□□□ -0.77
SHMT2-211ENST00000554310 MYOZ3Q8TDC0 251 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 TMEM230Q96A57 120 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 C5orf30Q96GV9 206 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 GPR61Q9BZJ8 451 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms