RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FBXO5Q9UKT4 447 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 TFR2Q9UP52 801 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 ASB4Q9Y574 426 aa3.1□□□□□ -1.91
HMGB1P23-201ENST00000518743 IGLL5B9A064 214 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 SPAG7O75391 227 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 PROSCO94903 275 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 YIF1AO95070 293 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 NQO2P16083 231 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 CXCR1P25024 350 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 MPV17P39210 176 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 PMELP40967 661 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 OR12D2P58182 307 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 RPL23P62829 140 aaKnown RBP3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 TPM4P67936 248 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 C2orf80Q0P641 193 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 DYNC1I2Q13409 638 aaKnown RBP3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 CEACAM16Q2WEN9 425 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 FAM201AQ5SY85 155 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 TRMT10CQ7L0Y3 403 aaKnown RBP3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 MRPL52Q86TS9 123 aaKnown RBP3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 LINC01551Q86U37 167 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 OSR2Q8N2R0 312 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 SLC30A7Q8NEW0 376 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 OR9A2Q8NGT5 310 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 ENKURQ8TC29 256 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 RXFP4Q8TDU9 374 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 GTF2H4Q92759 462 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 Q96MT0 163 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 RSG1Q9BU20 258 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 EFCAB11Q9BUY7 163 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 BCL2L14Q9BZR8 327 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 CLEC2DQ9UHP7 191 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 FBXL3Q9UKT7 428 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 TMEM14AQ9Y6G1 99 aa3.09□□□□□ -1.91
HMGB1P23-201ENST00000518743 FAM240AA0A1B0GVK7 77 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 TVP23AA6NH52 213 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 CRXO43186 299 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 EIF1BO60739 113 aaKnown RBP3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 TPM3P06753 285 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 PRPS1L1P21108 318 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 GABRA3P34903 492 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 GGT2P36268 569 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 TCTAP57738 103 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 KRTAP10-6P60371 365 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 KRTAP10-7P60409 375 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 TBC1D28Q2M2D7 210 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 LGALS9BQ3B8N2 356 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 RNF212Q495C1 297 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 ABCA11PQ4W5N1 156 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 ACTL10Q5JWF8 245 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 HHATQ5VTY9 493 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 MED27Q6P2C8 311 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 LYG2Q86SG7 212 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 MKXQ8IYA7 352 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 FAM45AQ8TCE6 357 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 SFXN5Q8TD22 340 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 GPR119Q8TDV5 335 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 C15orf40Q8WUR7 153 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 DCAKDQ8WVC6 231 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 OR2V2Q96R30 315 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 SLC25A39Q9BZJ4 359 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 HDHD2Q9H0R4 259 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 C1orf198Q9H425 327 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 ACOT13Q9NPJ3 140 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 FBXO6Q9NRD1 293 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 MRM2Q9UI43 246 aaKnown RBP3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 RWDD2AQ9UIY3 292 aa3.08□□□□□ -1.92
HMGB1P23-201ENST00000518743 A0A1W2PRG6 482 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 TRPC5OSA6NMA1 111 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF705GA8MUZ8 300 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 BPY2O14599 106 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF861PO60384 105 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 UBL3O95164 117 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 IGKV1D-16P01601 117 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF688P0C7X2 276 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 OGNP20774 298 aaKnown RBP3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 SERPINB1P30740 379 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 PRSS3P35030 304 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 CACNG7P62955 275 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 BSXQ3C1V8 233 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 SLC48A1Q6P1K1 146 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 MMGT1Q8N4V1 131 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 CDS1Q92903 461 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 FAM19A4Q96LR4 140 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZIM3Q96PE6 472 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 TMBIM4Q9HC24 238 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 ABCB9Q9NP78 766 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 HDGFL3Q9Y3E1 203 aa3.07□□□□□ -1.92
HMGB1P23-201ENST00000518743 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 SMIM26A0A096LP01 95 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 TMEM213A2RRL7 107 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 OVOL1O14753 267 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 UBDO15205 165 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 SCN2BO60939 215 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 GATBO75879 557 aaKnown RBP3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 PTTG1O95997 202 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 MT-ND4P03905 459 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 OCMP0CE72 109 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF19P17023 458 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 PGAM1P18669 254 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms