RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 NUCB2P80303 420 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 TGFBIQ15582 683 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 BATFQ16520 125 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 TBC1D28Q2M2D7 210 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 AADACL3Q5VUY0 350 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 RWDD4Q6NW29 188 aaKnown RBP-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 C1orf122Q6ZSJ8 110 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 NDUFAF7Q7L592 441 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 FAM19A3Q7Z5A8 133 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 CMC1Q7Z7K0 106 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 UBE2DNLQ8IWF7 75 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 GATD1Q8NB37 220 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 Q8WTZ3 238 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 ECHDC3Q96DC8 303 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 ZNF714Q96N38 554 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 RILPQ96NA2 401 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 OR2M4Q96R27 311 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 FICDQ9BVA6 458 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 GNB1LQ9BYB4 327 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 ULBP3Q9BZM4 244 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 SHCBP1LQ9BZQ2 653 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 SLC5A7Q9GZV3 580 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 TCEAL2Q9H3H9 227 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 NT5MQ9NPB1 228 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 RAB20Q9NX57 234 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 HMG20BQ9P0W2 317 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 DNAJB9Q9UBS3 223 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 RSL24D1Q9UHA3 163 aaKnown RBP-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 FBXO5Q9UKT4 447 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 MGAT4BQ9UQ53 548 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 SIPA1L1O43166 1804 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 ADGRB1O14514 1584 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 ADGRG4Q8IZF6 3080 aa-1.9□□□□□ -2.71
RNU6-1238P-201ENST00000517215 RPGRIP1LQ68CZ1 1315 aa-1.91□□□□□ -2.71
RNU6-1238P-201ENST00000517215 KDM6AO15550 1401 aaPredicted RBP-1.91□□□□□ -2.71
RNU6-1238P-201ENST00000517215 TNS3Q68CZ2 1445 aa-1.91□□□□□ -2.71
RNU6-1238P-201ENST00000517215 CASKIN1Q8WXD9 1431 aa-1.91□□□□□ -2.71
RNU6-1238P-201ENST00000517215 COL24A1Q17RW2 1714 aa-1.91□□□□□ -2.71
RNU6-1238P-201ENST00000517215 A0A0B4J2E0 115 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 A0A1W2PPE3 182 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 TCRBV4S1A1TA0A5B7 111 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 IFRD1O00458 451 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 TCAPO15273 167 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 HBE1P02100 147 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 OR5AL1P0C617 328 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 SULT1A3P0DMM9 295 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 SULT1A4P0DMN0 295 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 LIPCP11150 499 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 PDE6GP18545 87 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 TNNI3P19429 210 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 M6PRP20645 277 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 CA8P35219 290 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 NAA10P41227 235 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 HSPA13P48723 471 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 AP2S1P53680 142 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 MP68P56378 58 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 RAB2AP61019 212 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 TFDP2Q14188 446 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 TOMM34Q15785 309 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 IQCJQ1A5X6 159 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 IDNKQ5T6J7 187 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 SLC8B1Q6J4K2 584 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 SLC25A24Q6NUK1 477 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 BLOC1S2Q6QNY1 142 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 C2orf82Q6UX34 121 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 ZNF833PQ6ZTB9 187 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 VTCN1Q7Z7D3 282 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 ZBTB8OSQ8IWT0 167 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 FADS6Q8N9I5 356 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 OR52B4Q8NGK2 314 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 CTNNBL1Q8WYA6 563 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 RAB1CQ92928 201 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 ISOC1Q96CN7 298 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 RCN3Q96D15 328 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 FMC1Q96HJ9 113 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 SLC29A1Q99808 456 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 TXLNGYQ9BZA5 131 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 POLE4Q9NR33 117 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 MS4A12Q9NXJ0 267 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 IFNKQ9P0W0 207 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 OR52A1Q9UKL2 312 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 OR51B2Q9Y5P1 312 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 ABCC12Q96J65 1359 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 SIPA1L3O60292 1781 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 MAP2P11137 1827 aaKnown RBP-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 FMN1Q68DA7 1419 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 MYO3BQ8WXR4 1341 aa-1.91□□□□□ -2.72
RNU6-1238P-201ENST00000517215 KIDINS220Q9ULH0 1771 aa-1.92□□□□□ -2.72
RNU6-1238P-201ENST00000517215 LOC107986453A0A1B0GWG9 222 aa-1.92□□□□□ -2.72
RNU6-1238P-201ENST00000517215 A0A1B0GXF2 115 aa-1.92□□□□□ -2.72
RNU6-1238P-201ENST00000517215 HEATR9A2RTY3 570 aa-1.92□□□□□ -2.72
RNU6-1238P-201ENST00000517215 H3BP45 60 aa-1.92□□□□□ -2.72
RNU6-1238P-201ENST00000517215 BOLA2-SMG1P6H3BVE0 249 aa-1.92□□□□□ -2.72
RNU6-1238P-201ENST00000517215 NDUFS8O00217 210 aa-1.92□□□□□ -2.72
RNU6-1238P-201ENST00000517215 RAB29O14966 203 aa-1.92□□□□□ -2.72
RNU6-1238P-201ENST00000517215 CHADO15335 359 aa-1.92□□□□□ -2.72
RNU6-1238P-201ENST00000517215 FGF16O43320 207 aa-1.92□□□□□ -2.72
RNU6-1238P-201ENST00000517215 DKC1O60832 514 aaKnown RBP eCLIP-1.92□□□□□ -2.72
RNU6-1238P-201ENST00000517215 PRM2P04554 102 aa-1.92□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms