RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ZNF137PP52743 207 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 VWC2Q2TAL6 325 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 AVPI1Q5T686 147 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 IQCF2Q8IXL9 164 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 OR5AN1Q8NGI8 311 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 RBMXL1Q96E39 390 aaKnown RBP17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 A0A1W2PPR1 153 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 FAM74A7A6NL05 159 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 SERF2P84101 59 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 GUK1Q16774 197 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 FAM74A3Q4VXF1 159 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 CENPVQ7Z7K6 275 aaPredicted RBP17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 PUSL1Q8N0Z8 303 aaKnown RBP17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 OR9G1Q8NH87 305 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 NEU4Q8WWR8 484 aaPredicted RBP17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 TMEM186Q96B77 213 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 HRNRQ86YZ3 2850 aaPredicted RBP17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 SPTBN1Q01082 2364 aaKnown RBP17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 LRBAP50851 2863 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 A0A1B0GW64 132 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 SRRM4A7MD48 611 aaKnown RBP17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 H0YJW9 148 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 SCAF4O95104 1147 aaKnown RBP17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 OR10X1Q8NGY0 326 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 TIMM9Q9Y5J7 89 aa17.39■□□□□ 0.37
UBE2D3-216ENST00000503742 LY6HO94772 140 aa17.38■□□□□ 0.37
UBE2D3-216ENST00000503742 HSPE1P61604 102 aaKnown RBP17.38■□□□□ 0.37
UBE2D3-216ENST00000503742 GUCA2BQ16661 112 aa17.38■□□□□ 0.37
UBE2D3-216ENST00000503742 CLCC1Q96S66 551 aa17.38■□□□□ 0.37
UBE2D3-216ENST00000503742 TMEM133Q9H2Q1 129 aa17.38■□□□□ 0.37
UBE2D3-216ENST00000503742 MALRD1Q5VYJ5 2156 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 BTBD17A6NE02 478 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 SFTA3P0C7M3 94 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 RPS16P62249 146 aaKnown RBP17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 RPP30P78346 268 aaKnown RBP17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 TLE4Q04727 773 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 ABHD12Q8N2K0 398 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 C8orf46Q8TAG6 207 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 RPRMQ9NS64 109 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 MIOXQ9UGB7 285 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 UPK2O00526 184 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 APOA2P02652 100 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 MDKP21741 143 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 CCL20P78556 96 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 PEA15Q15121 130 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 OSR1Q8TAX0 266 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 NABP2Q9BQ15 211 aa17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 HEYLQ9NQ87 328 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-216ENST00000503742 H7C2Y5 167 aa17.36■□□□□ 0.37
UBE2D3-216ENST00000503742 SNAPINO95295 136 aa17.36■□□□□ 0.37
UBE2D3-216ENST00000503742 DIAPH2-AS1Q14236 149 aa17.36■□□□□ 0.37
UBE2D3-216ENST00000503742 TMEM177Q53S58 311 aa17.36■□□□□ 0.37
UBE2D3-216ENST00000503742 WDR25Q64LD2 544 aaPredicted RBP17.36■□□□□ 0.37
UBE2D3-216ENST00000503742 NEIL1Q96FI4 390 aaPredicted RBP17.36■□□□□ 0.37
UBE2D3-216ENST00000503742 VSIRQ9H7M9 311 aa17.36■□□□□ 0.37
UBE2D3-216ENST00000503742 BET1LQ9NYM9 111 aa17.36■□□□□ 0.37
UBE2D3-216ENST00000503742 PRNDQ9UKY0 176 aa17.36■□□□□ 0.37
UBE2D3-216ENST00000503742 TRAV1-1A0A0B4J248 108 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 A0A1B0GV50 99 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 REG1BP48304 166 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 OR8B3Q8NGG8 313 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 TMEM170AQ8WVE7 144 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 RAB1CQ92928 201 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 OR8B2Q96RD0 313 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 PBDC1Q9BVG4 233 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 DCHS2Q6V1P9 2916 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 PRSS46E5RG02 174 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 IFNA10P01566 189 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 RBP4P02753 201 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 TNFRSF14Q92956 283 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 EIF5A2Q9GZV4 153 aaKnown RBP17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 ZNF257Q9Y2Q1 563 aa17.35■□□□□ 0.37
UBE2D3-216ENST00000503742 RRHO14718 337 aa17.34■□□□□ 0.37
UBE2D3-216ENST00000503742 F12P00748 615 aaPredicted RBP17.34■□□□□ 0.37
UBE2D3-216ENST00000503742 SAA1P0DJI8 122 aaPredicted RBP17.34■□□□□ 0.37
UBE2D3-216ENST00000503742 HOXA1P49639 335 aaPredicted RBP17.34■□□□□ 0.37
UBE2D3-216ENST00000503742 SFT2D1Q8WV19 159 aa17.34■□□□□ 0.37
UBE2D3-216ENST00000503742 TIMD4Q96H15 378 aa17.34■□□□□ 0.37
UBE2D3-216ENST00000503742 PCGF1Q9BSM1 259 aa17.34■□□□□ 0.37
UBE2D3-216ENST00000503742 KIAA1456Q9P272 454 aa17.34■□□□□ 0.37
UBE2D3-216ENST00000503742 OR51B2Q9Y5P1 312 aa17.34■□□□□ 0.37
UBE2D3-216ENST00000503742 PPIAL4CA0A0B4J2A2 164 aa17.33■□□□□ 0.37
UBE2D3-216ENST00000503742 A0A1W2PPH5 198 aa17.33■□□□□ 0.37
UBE2D3-216ENST00000503742 C19orf84I3L1E1 186 aa17.33■□□□□ 0.37
UBE2D3-216ENST00000503742 HBE1P02100 147 aa17.33■□□□□ 0.37
UBE2D3-216ENST00000503742 PPIAL4GP0DN37 164 aa17.33■□□□□ 0.37
UBE2D3-216ENST00000503742 FGF7P21781 194 aa17.33■□□□□ 0.37
UBE2D3-216ENST00000503742 TMEM41BQ5BJD5 291 aa17.33■□□□□ 0.37
UBE2D3-216ENST00000503742 PDPNQ86YL7 162 aa17.33■□□□□ 0.37
UBE2D3-216ENST00000503742 LY6G5BQ8NDX9 201 aa17.33■□□□□ 0.37
UBE2D3-216ENST00000503742 KLF2Q9Y5W3 355 aaPredicted RBP17.33■□□□□ 0.37
UBE2D3-216ENST00000503742 KBTBD11O94819 623 aa17.33■□□□□ 0.36
UBE2D3-216ENST00000503742 MYOD1P15172 320 aa17.33■□□□□ 0.36
UBE2D3-216ENST00000503742 IGFBP2P18065 325 aa17.33■□□□□ 0.36
UBE2D3-216ENST00000503742 ZNF726P1Q15940 193 aa17.33■□□□□ 0.36
UBE2D3-216ENST00000503742 ETV3LQ6ZN32 361 aa17.33■□□□□ 0.36
UBE2D3-216ENST00000503742 MBD3L1Q8WWY6 194 aa17.33■□□□□ 0.36
UBE2D3-216ENST00000503742 LHX4Q969G2 390 aa17.33■□□□□ 0.36
UBE2D3-216ENST00000503742 HARBI1Q96MB7 349 aa17.33■□□□□ 0.36
UBE2D3-216ENST00000503742 GGACTQ9BVM4 153 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms