RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 PRSS46E5RG02 174 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 IRF2P14316 349 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 TMEM30BQ3MIR4 351 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 UTF1Q5T230 341 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 DUX4L9Q6RFH8 374 aaPredicted RBP13.65□□□□□ -0.22
VCAN-204ENST00000502527 ZNF788Q6ZQV5 615 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 ABHD12Q8N2K0 398 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 NUP37Q8NFH4 326 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 IDI2-AS1Q9NZ38 188 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 C11orf94C9JXX5 98 aa13.64□□□□□ -0.23
VCAN-204ENST00000502527 TM4SF5O14894 197 aa13.64□□□□□ -0.23
VCAN-204ENST00000502527 C22orf34Q6ZV56 151 aa13.64□□□□□ -0.23
VCAN-204ENST00000502527 C16orf82Q7Z2V1 217 aa13.64□□□□□ -0.23
VCAN-204ENST00000502527 LYG1Q8N1E2 194 aa13.64□□□□□ -0.23
VCAN-204ENST00000502527 ZNF439Q8NDP4 499 aa13.64□□□□□ -0.23
VCAN-204ENST00000502527 CCL13Q99616 98 aa13.64□□□□□ -0.23
VCAN-204ENST00000502527 MS4A5Q9H3V2 200 aa13.64□□□□□ -0.23
VCAN-204ENST00000502527 LINC00574Q9H8X3 128 aa13.64□□□□□ -0.23
VCAN-204ENST00000502527 FOXA2Q9Y261 457 aaPredicted RBP13.64□□□□□ -0.23
VCAN-204ENST00000502527 DOCK11Q5JSL3 2073 aa13.64□□□□□ -0.23
VCAN-204ENST00000502527 TRAV38-1A0A0B4J264 116 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 DEFA4P12838 97 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 HSPE1P61604 102 aaKnown RBP13.63□□□□□ -0.23
VCAN-204ENST00000502527 TCF15Q12870 199 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 GCSAMLQ5JQS6 135 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 TMEM108Q6UXF1 575 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 CORO2AQ92828 525 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 KCNIP2Q9NS61 270 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 ZFHX4Q86UP3 3567 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 PDE6DO43924 150 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 VENTXO95231 258 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 HRASP01112 189 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 GYPAP02724 150 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 S100PP25815 95 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 OR4A47Q6IF82 309 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 TCF23Q7RTU1 214 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 ZNF383Q8NA42 475 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 TMEM170AQ8WVE7 144 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 NPVFQ9HCQ7 196 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 ENY2Q9NPA8 101 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 TMEM14BQ9NUH8 114 aa13.63□□□□□ -0.23
VCAN-204ENST00000502527 CFAP47Q6ZTR5 3102 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 CADP27708 2225 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 H7BYZ3 331 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 S100A2P29034 98 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 TEX36Q5VZQ5 186 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 FAM216BQ8N7L0 139 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 OR10A7Q8NGE5 316 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 OR5B12Q96R08 314 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 MGST2Q99735 147 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 GGTLC1Q9BX51 225 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 PXMP4Q9Y6I8 212 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 ELOA3CA0A087WX78 387 aaPredicted RBP13.62□□□□□ -0.23
VCAN-204ENST00000502527 MKRN2OSH3BPM6 223 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 PPP1R2P9O14990 202 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 PFN1P07737 140 aaKnown RBP13.62□□□□□ -0.23
VCAN-204ENST00000502527 TRGC1P0CF51 173 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 POU2AF1Q16633 256 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 SPNS3Q6ZMD2 512 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 ABHD5Q8WTS1 349 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 FRZBQ92765 325 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 ANAPC16Q96DE5 110 aa13.62□□□□□ -0.23
VCAN-204ENST00000502527 GAR1Q9NY12 217 aaKnown RBP13.62□□□□□ -0.23
VCAN-204ENST00000502527 IFITM10A6NMD0 228 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 C16orf97H3BN30 126 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 PRRG2O14669 202 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 FABP1P07148 127 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 TNFRSF1AP19438 455 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 NPY1RP25929 384 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 CCKARP32238 428 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 GNG10P50151 68 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 B2MP61769 119 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 CTAG1AP78358 180 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 SLC24A4Q8NFF2 622 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 PYGO2Q9BRQ0 406 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 OR51M1Q9H341 326 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 PATZ1Q9HBE1 687 aaKnown RBP13.61□□□□□ -0.23
VCAN-204ENST00000502527 ELOVL5Q9NYP7 299 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 RPUSD1Q9UJJ7 312 aaKnown RBP13.61□□□□□ -0.23
VCAN-204ENST00000502527 PRNDQ9UKY0 176 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 LSM4Q9Y4Z0 139 aaKnown RBP13.61□□□□□ -0.23
VCAN-204ENST00000502527 SPENQ96T58 3664 aaKnown RBP13.61□□□□□ -0.23
VCAN-204ENST00000502527 ASPMQ8IZT6 3477 aa13.61□□□□□ -0.23
VCAN-204ENST00000502527 hADV38S2A0JD32 116 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 NKX6-3A6NJ46 265 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 GALR1P47211 349 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 OR51G1Q8NGK1 321 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 ZCCHC14Q8WYQ9 949 aaKnown RBP13.6□□□□□ -0.23
VCAN-204ENST00000502527 TXNDC17Q9BRA2 123 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 SRD5A3Q9H8P0 318 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 GSN-AS1Q9NRJ2 163 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 A0A0G2JNJ9 132 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 F6UZH7 168 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 CXorf1O96002 111 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 CST9LP1Q5W188 147 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 MIC13Q5XKP0 118 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 SLC25A48Q6ZT89 311 aaKnown RBP13.6□□□□□ -0.23
VCAN-204ENST00000502527 DOLPP1Q86YN1 238 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 TGIF2LYQ8IUE0 185 aa13.6□□□□□ -0.23
VCAN-204ENST00000502527 Q9UFV3 132 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms