RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	OR11H2	Q8NH07	326 aa		7.76	□□□□□ -1.17
APTX-222	ENST00000478279	OR5B3	Q8NH48	314 aa		7.76	□□□□□ -1.17
APTX-222	ENST00000478279	OR10J5	Q8NHC4	309 aa		7.76	□□□□□ -1.17
APTX-222	ENST00000478279	CD300LF	Q8TDQ1	290 aa		7.76	□□□□□ -1.17
APTX-222	ENST00000478279	PYDC1	Q8WXC3	89 aa		7.76	□□□□□ -1.17
APTX-222	ENST00000478279	TMEM80	Q96HE8	168 aa		7.76	□□□□□ -1.17
APTX-222	ENST00000478279	ARHGAP5-AS1	Q96IT6	56 aa		7.76	□□□□□ -1.17
APTX-222	ENST00000478279	URM1	Q9BTM9	101 aa	Known RBP	7.76	□□□□□ -1.17
APTX-222	ENST00000478279	PLA2G2E	Q9NZK7	142 aa		7.76	□□□□□ -1.17
APTX-222	ENST00000478279	RBM7	Q9Y580	266 aa	Known RBP	7.76	□□□□□ -1.17
APTX-222	ENST00000478279		E7EUB6	86 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	RTL8C	O15255	209 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	CD37	P11049	281 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	CEL	P19835	753 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	ADM	P35318	185 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	RPL27A	P46776	148 aa	Known RBP	7.75	□□□□□ -1.17
APTX-222	ENST00000478279	LRRTM1	Q86UE6	522 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	OR6M1	Q8NGM8	313 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	PHYHIP	Q92561	330 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	CXorf58	Q96LI9	332 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	DCUN1D5	Q9BTE7	237 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	CABLES2	Q9BTV7	478 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	PECR	Q9BY49	303 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	OR51E2	Q9H255	320 aa		7.75	□□□□□ -1.17
APTX-222	ENST00000478279	IGLV11-55	A0A075B6I3	123 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	IGHV3-35	A0A0C4DH35	117 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279		A0A1B0GW64	132 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	MFSD2B	A6NFX1	497 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	DEFB4A	O15263	64 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	DIRAS3	O95661	229 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	ZNF735	P0CB33	412 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	AREG	P15514	252 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	GPR183	P32249	361 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	PLET1	Q6UQ28	207 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	NR2C2AP	Q86WQ0	139 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	APRG1	Q8IVJ8	170 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	OR4A5	Q8NH83	315 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	TMEM190	Q8WZ59	177 aa		7.74	□□□□□ -1.17
APTX-222	ENST00000478279	ZNF436	Q9C0F3	470 aa	Predicted RBP	7.74	□□□□□ -1.17
APTX-222	ENST00000478279	FCGR3B	O75015	233 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	DEFA4	P12838	97 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	MAS1L	P35410	378 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	RASSF2	P50749	326 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	ARFRP1	Q13795	201 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	INSL4	Q14641	139 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	ACSM3	Q53FZ2	586 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	PLAC9	Q5JTB6	97 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	RBM48	Q5RL73	367 aa	Known RBP	7.73	□□□□□ -1.17
APTX-222	ENST00000478279	VKORC1L1	Q8N0U8	176 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	VSTM2A	Q8TAG5	236 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	TMEM167A	Q8TBQ9	72 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	ZNF502	Q8TBZ5	544 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	OR2A7	Q96R45	310 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	C9orf16	Q9BUW7	83 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	HRH4	Q9H3N8	390 aa		7.73	□□□□□ -1.17
APTX-222	ENST00000478279	DAZ1	Q9NQZ3	744 aa	Known RBP	7.73	□□□□□ -1.17
APTX-222	ENST00000478279	IGHV4-4	A0A075B6R2	117 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	EFCAB10	A6NFE3	127 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	CIB2	O75838	187 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	KBTBD11	O94819	623 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	CDK1	P06493	297 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	CTSD	P07339	412 aa	Predicted RBP	7.72	□□□□□ -1.17
APTX-222	ENST00000478279	RPA2	P15927	270 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	PSMD7	P51665	324 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	CMC4	P56277	68 aa	Predicted RBP	7.72	□□□□□ -1.17
APTX-222	ENST00000478279	MRPS15	P82914	257 aa	Known RBP	7.72	□□□□□ -1.17
APTX-222	ENST00000478279	IRF3	Q14653	427 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	P2RY14	Q15391	338 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	ZNF124	Q15973	351 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	PUSL1	Q8N0Z8	303 aa	Known RBP	7.72	□□□□□ -1.17
APTX-222	ENST00000478279	GINS4	Q9BRT9	223 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	MRPS7	Q9Y2R9	242 aa	Known RBP	7.72	□□□□□ -1.17
APTX-222	ENST00000478279	PRELID3B	Q9Y3B1	194 aa		7.72	□□□□□ -1.17
APTX-222	ENST00000478279	TRAV10	A0A0B4J240	114 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	TGOLN2	O43493	480 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	REG1A	P05451	166 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	FCGR3A	P08637	254 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	PTBP1	P26599	531 aa	Known RBP eCLIP	7.71	□□□□□ -1.18	3e-8	■■■■■ 34.1
APTX-222	ENST00000478279	WNT4	P56705	351 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	RPL30	P62888	115 aa	Known RBP	7.71	□□□□□ -1.18
APTX-222	ENST00000478279	ST3GAL4	Q11206	333 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	TMEM187	Q14656	261 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	HSD17B12	Q53GQ0	312 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	PVRIG	Q6DKI7	326 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	KCTD9	Q7L273	389 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	SSX9	Q7RTT3	188 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	ZNF575	Q86XF7	245 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	H1FOO	Q8IZA3	346 aa	Predicted RBP	7.71	□□□□□ -1.18
APTX-222	ENST00000478279	MS4A15	Q8N5U1	240 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	POM121L12	Q8N7R1	296 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	ZNF555	Q8NEP9	628 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279	OR56B1	Q8NGI3	324 aa		7.71	□□□□□ -1.18
APTX-222	ENST00000478279		K7EMT4	169 aa		7.7	□□□□□ -1.18
APTX-222	ENST00000478279		M0R2N4	97 aa		7.7	□□□□□ -1.18
APTX-222	ENST00000478279	SLC17A2	O00624	439 aa		7.7	□□□□□ -1.18
APTX-222	ENST00000478279	CA1	P00915	261 aa	Predicted RBP	7.7	□□□□□ -1.18
APTX-222	ENST00000478279	HLA-DMB	P28068	263 aa		7.7	□□□□□ -1.18
APTX-222	ENST00000478279	RPL8	P62917	257 aa	Known RBP	7.7	□□□□□ -1.18
APTX-222	ENST00000478279	SSX1	Q16384	188 aa		7.7	□□□□□ -1.18
APTX-222	ENST00000478279	LGALS9B	Q3B8N2	356 aa		7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms