RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SLC25A42Q86VD7 318 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 HOGA1Q86XE5 327 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 Q8N402 240 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 GVQW1Q8N7I0 195 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 BEST4Q8NFU0 473 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 TMEM167AQ8TBQ9 72 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 TCTEX1D2Q8WW35 142 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 TAS2R8Q9NYW2 309 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 PEMTQ9UBM1 199 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 ZNF257Q9Y2Q1 563 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 DMRT1Q9Y5R6 373 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 HMX3A6NHT5 357 aa11.61□□□□□ -0.55
VTI1A-203ENST00000472892 E7EUB6 86 aa11.61□□□□□ -0.55
VTI1A-203ENST00000472892 FCGR2CP31995 323 aa11.61□□□□□ -0.55
VTI1A-203ENST00000472892 MAS1LP35410 378 aa11.61□□□□□ -0.55
VTI1A-203ENST00000472892 EXOSC2Q13868 293 aaKnown RBP11.61□□□□□ -0.55
VTI1A-203ENST00000472892 C4orf48Q5BLP8 95 aa11.61□□□□□ -0.55
VTI1A-203ENST00000472892 FAM209BQ5JX69 171 aa11.61□□□□□ -0.55
VTI1A-203ENST00000472892 LCN12Q6JVE5 192 aa11.61□□□□□ -0.55
VTI1A-203ENST00000472892 CITED4Q96RK1 184 aa11.61□□□□□ -0.55
VTI1A-203ENST00000472892 LOC100506127A0A0U1RQW1 187 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 A0A1B0GW64 132 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 IZUMO1RA6ND01 250 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 NPIPB5A8MRT5 1133 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 TMEM127O75204 238 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 OR2J3O76001 311 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 HRASP01112 189 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 CRYGCP07315 174 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 ZNF735P0CB33 412 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 PTHLHP12272 177 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 ARPC4P59998 168 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 KLK9Q2XQG4 91 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 C15orf32Q32M92 178 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 ADAMTSL5Q6ZMM2 481 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 ZBTB34Q8NCN2 500 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 OR2K2Q8NGT1 345 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 GPHA2Q96T91 129 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 AUNIPQ9H7T9 357 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 DIABLOQ9NR28 239 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 CCL28Q9NRJ3 127 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 SLC2A9Q9NRM0 540 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 KLK9Q9UKQ9 250 aa11.6□□□□□ -0.55
VTI1A-203ENST00000472892 J3QL48 77 aa11.59□□□□□ -0.55
VTI1A-203ENST00000472892 KIR2DS2P43631 304 aa11.59□□□□□ -0.55
VTI1A-203ENST00000472892 RPL27AP46776 148 aaKnown RBP11.59□□□□□ -0.55
VTI1A-203ENST00000472892 NEDD8Q15843 81 aa11.59□□□□□ -0.55
VTI1A-203ENST00000472892 GTSCR1Q86UQ5 136 aa11.59□□□□□ -0.55
VTI1A-203ENST00000472892 OR13F1Q8NGS4 319 aa11.59□□□□□ -0.55
VTI1A-203ENST00000472892 SECTM1Q8WVN6 248 aa11.59□□□□□ -0.55
VTI1A-203ENST00000472892 FANCD2OSQ96PS1 177 aa11.59□□□□□ -0.55
VTI1A-203ENST00000472892 FYTTD1Q96QD9 318 aaKnown RBP11.59□□□□□ -0.55
VTI1A-203ENST00000472892 DPPA5A6NC42 116 aa11.58□□□□□ -0.56
VTI1A-203ENST00000472892 TNFSF12O43508 249 aa11.58□□□□□ -0.56
VTI1A-203ENST00000472892 PPYP01298 95 aa11.58□□□□□ -0.56
VTI1A-203ENST00000472892 RPL8P62917 257 aaKnown RBP11.58□□□□□ -0.56
VTI1A-203ENST00000472892 HAGHQ16775 308 aa11.58□□□□□ -0.56
VTI1A-203ENST00000472892 KCTD21Q4G0X4 260 aa11.58□□□□□ -0.56
VTI1A-203ENST00000472892 OR4A5Q8NH83 315 aa11.58□□□□□ -0.56
VTI1A-203ENST00000472892 GIMAP1Q8WWP7 306 aa11.58□□□□□ -0.56
VTI1A-203ENST00000472892 AIFM2Q9BRQ8 373 aa11.58□□□□□ -0.56
VTI1A-203ENST00000472892 BET1LQ9NYM9 111 aa11.58□□□□□ -0.56
VTI1A-203ENST00000472892 FBXL7Q9UJT9 491 aa11.58□□□□□ -0.56
VTI1A-203ENST00000472892 ZNF785A8K8V0 405 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 PPP5D1E7EU14 171 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 LGALS9O00182 355 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 RBFOX2O43251 390 aaKnown RBP eCLIP11.57□□□□□ -0.56
VTI1A-203ENST00000472892 GGCTO75223 188 aaKnown RBP11.57□□□□□ -0.56
VTI1A-203ENST00000472892 NDUFB8O95169 186 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 LYL1P12980 280 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 AREGP15514 252 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 CTRB1P17538 263 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 HLA-GP17693 338 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 PSMB6P28072 239 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 CBX5P45973 191 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 DEFB114Q30KQ6 69 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 CD300EQ496F6 205 aaPredicted RBP11.57□□□□□ -0.56
VTI1A-203ENST00000472892 CTRB2Q6GPI1 263 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 OR4A47Q6IF82 309 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 C19orf35Q6ZS72 473 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 SSX9Q7RTT3 188 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 GPHB5Q86YW7 130 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 SPAG16Q8N0X2 631 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 OR5AP2Q8NGF4 316 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 SPATA25Q9BR10 227 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 SLC5A7Q9GZV3 580 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 TUBA4BQ9H853 241 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 EDA2RQ9HAV5 297 aa11.57□□□□□ -0.56
VTI1A-203ENST00000472892 CGB1A6NKQ9 187 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 SULT1C2O00338 296 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 XRCC3O43542 346 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 OR2C1O95371 312 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 DHFRP00374 187 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 HPRT1P00492 218 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 FOLR2P14207 255 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 TAS2R31P59538 309 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 POU2AF1Q16633 256 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 TIMM50Q3ZCQ8 353 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 LINC00322Q6ZN03 302 aaPredicted RBP11.56□□□□□ -0.56
VTI1A-203ENST00000472892 CROCCP3Q8IVE0 287 aa11.56□□□□□ -0.56
VTI1A-203ENST00000472892 LAX1Q8IWV1 398 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms