RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 BET1LQ9NYM9 111 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 A0A1W2PN81 502 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 KBTBD11O94819 623 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 PF4V1P10720 104 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 CD40LGP29965 261 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 CHRNA7P36544 502 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 ZNF79Q15937 498 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 SCGB2B2Q4G0G5 96 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 TBC1D26Q86UD7 250 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 ZNF695Q8IW36 515 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 CADM3Q8N126 398 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 Q8N402 240 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 OR4C16Q8NGL9 310 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 PRRT1Q99946 306 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 SLC2A9Q9NRM0 540 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 TNCP24821 2201 aa11.94□□□□□ -0.5
SDC3-203ENST00000471567 PKD1L1Q8TDX9 2849 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 NUDT19A8MXV4 375 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 MPPED1O15442 326 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 SOX15O60248 233 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 S1PR2O95136 353 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 IL6RP08887 468 aaPredicted RBP11.93□□□□□ -0.5
SDC3-203ENST00000471567 FGF2P09038 288 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 LPAR6P43657 344 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 RAB9AP51151 201 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 AP3S2P59780 193 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 SURF2Q15527 256 aaPredicted RBP11.93□□□□□ -0.5
SDC3-203ENST00000471567 ZNF585BQ52M93 769 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 OR4A47Q6IF82 309 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 LCNL1Q6ZST4 164 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 SSX9Q7RTT3 188 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 SRSF12Q8WXF0 261 aaKnown RBP11.93□□□□□ -0.5
SDC3-203ENST00000471567 DEDD2Q8WXF8 326 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 TRIM63Q969Q1 353 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 UBE2E2Q96LR5 201 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 KLK15Q9H2R5 256 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 SLC2A8Q9NY64 477 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 FBN3Q75N90 2809 aa11.93□□□□□ -0.5
SDC3-203ENST00000471567 VWFP04275 2813 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 A6NHS1 94 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 MSGN1A6NI15 193 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 H3BUA1 57 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 BRI3O95415 125 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 CTSDP07339 412 aaPredicted RBP11.92□□□□□ -0.5
SDC3-203ENST00000471567 PPP5CP53041 499 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 PIGPP57054 158 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 ERVK-16P61578 105 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 RPL8P62917 257 aaKnown RBP11.92□□□□□ -0.5
SDC3-203ENST00000471567 KIAA0141Q14154 515 aaPredicted RBP11.92□□□□□ -0.5
SDC3-203ENST00000471567 FAAP20Q6NZ36 180 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 ZNF491Q8N8L2 437 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 CCDC71LQ8N9Z2 235 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 KLHL30-AS1Q8NEE0 82 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 DMBX1Q8NFW5 382 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 OR13C8Q8NGS7 320 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 MARCH1Q8TCQ1 289 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 PHB2Q99623 299 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 SPIN2AQ99865 258 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 SPIN2BQ9BPZ2 258 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 SLA2Q9H6Q3 261 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 HRASLSQ9HDD0 168 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 SCP2D1Q9UJQ7 156 aa11.92□□□□□ -0.5
SDC3-203ENST00000471567 UPK2O00526 184 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 PF4P02776 101 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 FAUP35544 74 aaKnown RBP11.91□□□□□ -0.5
SDC3-203ENST00000471567 MYCNOSP40205 109 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 KLF9Q13886 244 aaPredicted RBP11.91□□□□□ -0.5
SDC3-203ENST00000471567 ASPHD1Q5U4P2 390 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 C18orf65Q6ZTR6 163 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 TOMM5Q8N4H5 51 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 GDPD1Q8N9F7 314 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 OR51S1Q8NGJ8 323 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 C4orf3Q8WVX3 66 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 MRGPRFQ96AM1 343 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 SRRQ9GZT4 340 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 TMEM140Q9NV12 185 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 COPZ2Q9P299 210 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 VSIG4Q9Y279 399 aa11.91□□□□□ -0.5
SDC3-203ENST00000471567 MARCH11A6NNE9 402 aa11.9□□□□□ -0.5
SDC3-203ENST00000471567 B3GALNT1O75752 331 aa11.9□□□□□ -0.5
SDC3-203ENST00000471567 RPA2P15927 270 aa11.9□□□□□ -0.5
SDC3-203ENST00000471567 HLA-GP17693 338 aa11.9□□□□□ -0.5
SDC3-203ENST00000471567 PI3P19957 117 aa11.9□□□□□ -0.5
SDC3-203ENST00000471567 RPL27AP46776 148 aaKnown RBP11.9□□□□□ -0.5
SDC3-203ENST00000471567 RUNX1Q01196 453 aa11.9□□□□□ -0.5
SDC3-203ENST00000471567 C8orf86Q6ZUL3 223 aa11.9□□□□□ -0.5
SDC3-203ENST00000471567 WFDC9Q8NEX5 89 aa11.9□□□□□ -0.5
SDC3-203ENST00000471567 OR5T1Q8NG75 326 aa11.9□□□□□ -0.5
SDC3-203ENST00000471567 SCGB3A2Q96PL1 93 aa11.9□□□□□ -0.5
SDC3-203ENST00000471567 GPR132Q9UNW8 380 aa11.9□□□□□ -0.5
SDC3-203ENST00000471567 C14orf166Q9Y224 244 aaKnown RBP11.9□□□□□ -0.5
SDC3-203ENST00000471567 H0Y980 276 aa11.89□□□□□ -0.51
SDC3-203ENST00000471567 KRASP01116 189 aa11.89□□□□□ -0.51
SDC3-203ENST00000471567 SERPINE2P07093 398 aa11.89□□□□□ -0.51
SDC3-203ENST00000471567 OR9G9P0C7N8 305 aa11.89□□□□□ -0.51
SDC3-203ENST00000471567 ZNF45Q02386 682 aa11.89□□□□□ -0.51
SDC3-203ENST00000471567 C10orf55Q5SWW7 151 aa11.89□□□□□ -0.51
SDC3-203ENST00000471567 ETV3LQ6ZN32 361 aa11.89□□□□□ -0.51
SDC3-203ENST00000471567 LINC00299Q6ZSB3 139 aa11.89□□□□□ -0.51
SDC3-203ENST00000471567 SLC25A42Q86VD7 318 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms