RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 PLAUP00749 431 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 REG1AP05451 166 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 DYNLT3P51808 116 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 HNRNPA3P51991 378 aaKnown RBP9.54□□□□□ -0.88
CECR3-201ENST00000428828 PPP1CBP62140 327 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 MALLQ13021 153 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 ABCA11PQ4W5N1 156 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 PET117Q6UWS5 81 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 SLC25A40Q8TBP6 338 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 NEUROG1Q92886 237 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 REEP6Q96HR9 211 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 LYZL4Q96KX0 146 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 ZNF665Q9H7R5 613 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 SLC35D1Q9NTN3 355 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 ANXA10Q9UJ72 324 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 ABCA4P78363 2273 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 HYPMO75409 117 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 IFNA5P01569 189 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 IL3RAP26951 378 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 COL8A1P27658 744 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 SUMO1P63165 101 aaKnown RBP9.54□□□□□ -0.88
CECR3-201ENST00000428828 MEF2BQ02080 365 aaPredicted RBP9.54□□□□□ -0.88
CECR3-201ENST00000428828 Q0VG73 95 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 COLCA1Q6ZS62 124 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 MRPL21Q7Z2W9 205 aaKnown RBP9.54□□□□□ -0.88
CECR3-201ENST00000428828 FAM222BQ8WU58 562 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 NECAP2Q9NVZ3 263 aa9.54□□□□□ -0.88
CECR3-201ENST00000428828 USP9YO00507 2555 aaPredicted RBP9.54□□□□□ -0.88
CECR3-201ENST00000428828 PIGBOS1A0A0B4J2F0 54 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 CEBPZOSA8MTT3 80 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 NUPR1O60356 82 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 ZNF20P17024 532 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 GCH1P30793 250 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 FABP6P51161 128 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 ID3Q02535 119 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 MSMO1Q15800 293 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 ODF3L1Q8IXM7 274 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 TMEM56Q96MV1 263 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 RPRMQ9NS64 109 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 RFNGQ9Y644 331 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 TMEM56-RWDD3S4R434 201 aa9.53□□□□□ -0.88
CECR3-201ENST00000428828 OR5B21A6NL26 309 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 SHISA9B4DS77 424 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 CTXN2P0C2S0 81 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 MPV17P39210 176 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 CST9LP1Q5W188 147 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 TCTEX1D1Q8N7M0 179 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 Q8N976 141 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 NECAP1Q8NC96 275 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 OR51T1Q8NGJ9 327 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 VN1R17PQ8TDU5 208 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 TOMM40LQ969M1 308 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 TXN2Q99757 166 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 HSPB9Q9BQS6 159 aa9.52□□□□□ -0.88
CECR3-201ENST00000428828 IGHV2-26A0A0B4J1V2 119 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 J3QR06 171 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 MLNRO43193 412 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 COX6B1P14854 86 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 CCL1P22362 96 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 OR3A4PP47883 348 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 MSMPQ1L6U9 139 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 ALKBH6Q3KRA9 238 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 SPATA45Q537H7 98 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 Q6ZN92 141 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 KLF14Q8TD94 323 aaPredicted RBP9.52□□□□□ -0.89
CECR3-201ENST00000428828 BANF2Q9H503 90 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 ZNF586Q9NXT0 402 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 DUSP13Q9UII6 198 aa9.52□□□□□ -0.89
CECR3-201ENST00000428828 SAA2-SAA4A0A096LPE2 208 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 hCG_38984A0A1B0GV85 526 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 A6NJY4 79 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 IFNL4K9M1U5 179 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 LOXP28300 417 aaPredicted RBP9.51□□□□□ -0.89
CECR3-201ENST00000428828 BLVRBP30043 206 aaPredicted RBP9.51□□□□□ -0.89
CECR3-201ENST00000428828 RUNX1Q01196 453 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 ZNF726P1Q15940 193 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 ZNF718Q3SXZ3 478 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 SP6Q3SY56 376 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 LRRC10Q5BKY1 277 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 DOK3Q7L591 496 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 LRP11Q86VZ4 500 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 NUP37Q8NFH4 326 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 TP53TG3Q9ULZ0 132 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 PIGLQ9Y2B2 252 aa9.51□□□□□ -0.89
CECR3-201ENST00000428828 FASNP49327 2511 aaKnown RBP9.51□□□□□ -0.89
CECR3-201ENST00000428828 CHD3Q12873 2000 aaKnown RBP9.51□□□□□ -0.89
CECR3-201ENST00000428828 RAI1Q7Z5J4 1906 aaPredicted RBP9.51□□□□□ -0.89
CECR3-201ENST00000428828 E7EQL1 145 aa9.5□□□□□ -0.89
CECR3-201ENST00000428828 J3QW42 95 aa9.5□□□□□ -0.89
CECR3-201ENST00000428828 TMPRSS2O15393 492 aa9.5□□□□□ -0.89
CECR3-201ENST00000428828 RAMP3O60896 148 aa9.5□□□□□ -0.89
CECR3-201ENST00000428828 ZNF737O75373 536 aa9.5□□□□□ -0.89
CECR3-201ENST00000428828 DHRS3O75911 302 aa9.5□□□□□ -0.89
CECR3-201ENST00000428828 FAHP16930 419 aa9.5□□□□□ -0.89
CECR3-201ENST00000428828 TSPOP30536 169 aa9.5□□□□□ -0.89
CECR3-201ENST00000428828 GLRXP35754 106 aa9.5□□□□□ -0.89
CECR3-201ENST00000428828 MDH2P40926 338 aaKnown RBP9.5□□□□□ -0.89
CECR3-201ENST00000428828 FGF8P55075 233 aaPredicted RBP9.5□□□□□ -0.89
CECR3-201ENST00000428828 LINC00310P59036 64 aa9.5□□□□□ -0.89
CECR3-201ENST00000428828 DMRTC1Q5HYR2 192 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms