RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 C14orf144Q96I85 54 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 RASL11BQ9BPW5 248 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 JPT1Q9UK76 154 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 IGKV1-12A0A0C4DH73 117 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 RRHO14718 337 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 ATXN7O15265 892 aaPredicted RBP9.37□□□□□ -0.91
HPS4-202ENST00000398145 IGKV1D-12P01611 117 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 CEACAM1P13688 526 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 CA7P43166 264 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 NRN1LQ496H8 165 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 C1orf174Q8IYL3 243 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 OR8B3Q8NGG8 313 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 GATAD1Q8WUU5 269 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 DNASE2BQ8WZ79 361 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 ASCL3Q9NQ33 180 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 THYN1Q9P016 225 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 ZFP30Q9Y2G7 519 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 IGLV3-12A0A075B6K2 115 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 IGLV3-32A0A0A0MS00 114 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 C17orf98A8MV24 154 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 EFNA2O43921 213 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 NAPSAO96009 420 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 PLAUP00749 431 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 C1QTNF9P0C862 333 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 GCSAMQ8N6F7 178 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 BEND2Q8NDZ0 799 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 TMEM171Q8WVE6 324 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 SSBP3Q9BWW4 388 aaPredicted RBP9.37□□□□□ -0.91
HPS4-202ENST00000398145 SMOC1Q9H4F8 434 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 RFNGQ9Y644 331 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 CA2P00918 260 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
HPS4-202ENST00000398145 MNX1P50219 401 aaPredicted RBP9.37□□□□□ -0.91
HPS4-202ENST00000398145 CSRP2Q16527 193 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 FAM214BQ7L5A3 538 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 TCF20Q9UGU0 1960 aaKnown RBP9.36□□□□□ -0.91
HPS4-202ENST00000398145 J3QW42 95 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 ZNF207O43670 478 aaKnown RBP9.36□□□□□ -0.91
HPS4-202ENST00000398145 RFPL3SP0C7P2 107 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 GBGT1Q8N5D6 347 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 KLF14Q8TD94 323 aaPredicted RBP9.36□□□□□ -0.91
HPS4-202ENST00000398145 OR8B2Q96RD0 313 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 CALYQ9NYX4 217 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 WNK2Q9Y3S1 2297 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 TMEM265A0A087WTH1 108 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 PATE3B3GLJ2 98 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 M0R296 226 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 IGLV3-19P01714 112 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 CRYABP02511 175 aaKnown RBP9.36□□□□□ -0.91
HPS4-202ENST00000398145 BTF3P20290 206 aaKnown RBP9.36□□□□□ -0.91
HPS4-202ENST00000398145 OTX1P32242 354 aaPredicted RBP9.36□□□□□ -0.91
HPS4-202ENST00000398145 RPL8P62917 257 aaKnown RBP9.36□□□□□ -0.91
HPS4-202ENST00000398145 AKIRIN1Q9H9L7 192 aaPredicted RBP9.36□□□□□ -0.91
HPS4-202ENST00000398145 HLA-DRB1P01911 266 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 CD55P08174 381 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 REG1BP48304 166 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 NMSQ5H8A3 153 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 TCF23Q7RTU1 214 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 TMEM116Q8NCL8 245 aa9.36□□□□□ -0.91
HPS4-202ENST00000398145 ZNF430Q9H8G1 570 aaPredicted RBP9.36□□□□□ -0.91
HPS4-202ENST00000398145 COX7A1P24310 79 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 PRNTQ86SH4 94 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 FAM222BQ8WU58 562 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 VOPP1Q96AW1 172 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 WBP1Q96G27 269 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 LAMTOR2Q9Y2Q5 125 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 NCBP2LA6PVI3 153 aaKnown RBP9.35□□□□□ -0.91
HPS4-202ENST00000398145 DLL1O00548 723 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 GNG7O60262 68 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 CGAP01215 116 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 SCGB1C2P0DMR2 95 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 NUTF2P61970 127 aaKnown RBP9.35□□□□□ -0.91
HPS4-202ENST00000398145 TMEM70Q9BUB7 260 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 NLRC5Q86WI3 1866 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 TMSB15BA0A087X1C1 80 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 PRR19A6NJB7 356 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 CIDEAO60543 219 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 CRYGSP22914 178 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 TMEM177Q53S58 311 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 C2orf88Q9BSF0 95 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 PRDM13Q9H4Q3 707 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 NRN1Q9NPD7 142 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 IGHV2-70P01814 119 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 NMUP48645 174 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 ATP5IP56385 69 aaPredicted RBP9.35□□□□□ -0.91
HPS4-202ENST00000398145 DNLZQ5SXM8 178 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 SAP25Q8TEE9 199 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 OPN3Q9H1Y3 402 aaPredicted RBP9.35□□□□□ -0.91
HPS4-202ENST00000398145 INSIG2Q9Y5U4 225 aa9.35□□□□□ -0.91
HPS4-202ENST00000398145 FBLL1A6NHQ2 334 aaKnown RBP9.34□□□□□ -0.91
HPS4-202ENST00000398145 EPOPA6NHQ4 379 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 UQCRFS1P47985 274 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 RND2P52198 227 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 RPP25LQ8N5L8 163 aaKnown RBP9.34□□□□□ -0.91
HPS4-202ENST00000398145 PGLYRP4Q96LB8 373 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 MS4A5Q9H3V2 200 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 HIGD1AQ9Y241 93 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 OR2T8A6NH00 312 aa9.34□□□□□ -0.91
HPS4-202ENST00000398145 ORM1P02763 201 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms