RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 RPL39P5Q59GN2 51 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 CT45A1Q5HYN5 189 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 UTF1Q5T230 341 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 HEPN1Q6WQI6 88 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 OR10A7Q8NGE5 316 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 CT45A3Q8NHU0 189 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 SMIM3Q9BZL3 60 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 SLC35B3Q9H1N7 401 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 IFI27L2Q9H2X8 130 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 ONECUT1Q9UBC0 465 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 TET2Q6N021 2002 aaPredicted RBP7.27□□□□□ -1.25
PHGDH-219ENST00000641513 ARID1AO14497 2285 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 PPIAL4CA0A0B4J2A2 164 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 C17orf98A8MV24 154 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 KIAA1324LA8MWY0 1029 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-219ENST00000641513 ITGB1BP1O14713 200 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 RAB29O14966 203 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 GPR37O15354 613 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 TXNL1O43396 289 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 SSSCA1O60232 199 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 FCGR3BO75015 233 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 IFNA4P05014 189 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 PPIAL4GP0DN37 164 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 ATP6V0CP27449 155 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 HOXA1P49639 335 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-219ENST00000641513 ARHGDIBP52566 201 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 POLR2GP62487 172 aaKnown RBP eCLIP7.26□□□□□ -1.25
PHGDH-219ENST00000641513 NHLH2Q02577 135 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 AKR1C1Q04828 323 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 SRSF1Q07955 248 aaKnown RBP eCLIP7.26□□□□□ -1.25
PHGDH-219ENST00000641513 WDR25Q64LD2 544 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-219ENST00000641513 OR10X1Q8NGY0 326 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 GPR146Q96CH1 333 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 MALSU1Q96EH3 234 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 S1PR3Q99500 378 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 AGMATQ9BSE5 352 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 PATZ1Q9HBE1 687 aaKnown RBP7.26□□□□□ -1.25
PHGDH-219ENST00000641513 BIN3Q9NQY0 253 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 MLXQ9UH92 298 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 PRELID1Q9Y255 219 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 FAM96BQ9Y3D0 163 aa7.26□□□□□ -1.25
PHGDH-219ENST00000641513 SAA2-SAA4A0A096LPE2 208 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 hCG_1809904A0A1W2PP81 198 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 A0A1W2PPE2 198 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 A0A1W2PR64 198 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 A0A1W2PRV1 198 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 FAM24AA6NFZ4 105 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 LINC00473A8K010 186 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 NUPL2O15504 423 aaKnown RBP7.25□□□□□ -1.25
PHGDH-219ENST00000641513 RAMP3O60896 148 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 S1PR2O95136 353 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 KRASP01116 189 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 IGKV1-39P01597 117 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 PRH1P02810 166 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 MT-ND4LP03901 98 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 IGKV1D-39P04432 117 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 HSPB1P04792 205 aaKnown RBP7.25□□□□□ -1.25
PHGDH-219ENST00000641513 SAA2P0DJI9 122 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-219ENST00000641513 DUTP33316 252 aaKnown RBP7.25□□□□□ -1.25
PHGDH-219ENST00000641513 G6PCP35575 357 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 THBS3P49746 956 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 PDLIM4P50479 330 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 RAB13P51153 203 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 PAX9P55771 341 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 LINC00205P59089 165 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 HBG1P69891 147 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 HBG2P69892 147 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 SERF2P84101 59 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 ZNF616Q08AN1 781 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 EIF4EBP1Q13541 118 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-219ENST00000641513 CLINT1Q14677 625 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 ZNF585BQ52M93 769 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 ZNF506Q5JVG8 444 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 NCR3LG1Q68D85 454 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 ZNF841Q6ZN19 808 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 CBLN2Q8IUK8 224 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 ZNF525Q8N782 197 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-219ENST00000641513 ZNF439Q8NDP4 499 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 OR5C1Q8NGR4 320 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 OR2G3Q8NGZ4 309 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 BSCL2Q96G97 398 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-219ENST00000641513 SSBP3Q9BWW4 388 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-219ENST00000641513 MAGT1Q9H0U3 335 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 LINC00574Q9H8X3 128 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 ZNRD1Q9P1U0 126 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 TIMM9Q9Y5J7 89 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 MALRD1Q5VYJ5 2156 aa7.25□□□□□ -1.25
PHGDH-219ENST00000641513 HELZ2Q9BYK8 2649 aaKnown RBP7.24□□□□□ -1.25
PHGDH-219ENST00000641513 LOC105371242A0A075B767 164 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 A0A087WWC5 75 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 A0A0G2JRQ6 117 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 FAM90A9PA6NNJ1 464 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 COLCA2A8K830 154 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 C9JQL5 133 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 OVOL3O00110 214 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 SYNGR2O43760 224 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 SOX15O60248 233 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 RBMXL2O75526 392 aaKnown RBP7.24□□□□□ -1.25
PHGDH-219ENST00000641513 TMEM50AO95807 157 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms