RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SRSF7Q16629 238 aaKnown RBP eCLIP11.27□□□□□ -0.61
IRF3-223ENST00000599223 ACTBL2Q562R1 376 aa11.27□□□□□ -0.61
IRF3-223ENST00000599223 PPP1R27Q86WC6 154 aa11.27□□□□□ -0.61
IRF3-223ENST00000599223 OR5AN1Q8NGI8 311 aa11.27□□□□□ -0.61
IRF3-223ENST00000599223 ENKURQ8TC29 256 aa11.27□□□□□ -0.61
IRF3-223ENST00000599223 CLCC1Q96S66 551 aa11.27□□□□□ -0.61
IRF3-223ENST00000599223 C7orf50Q9BRJ6 194 aaKnown RBP11.27□□□□□ -0.61
IRF3-223ENST00000599223 SCPEP1Q9HB40 452 aa11.27□□□□□ -0.61
IRF3-223ENST00000599223 CHMP1AQ9HD42 196 aaPredicted RBP11.27□□□□□ -0.61
IRF3-223ENST00000599223 AK3Q9UIJ7 227 aa11.27□□□□□ -0.61
IRF3-223ENST00000599223 TNCP24821 2201 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 H7C2Y5 167 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 SOCS1O15524 211 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 RBBP9O75884 186 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 OR8U9P0C7N5 309 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 FAUP35544 74 aaKnown RBP11.26□□□□□ -0.61
IRF3-223ENST00000599223 HLA-DRB3P79483 266 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 DEFA5Q01523 94 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 SSBP1Q04837 148 aaKnown RBP11.26□□□□□ -0.61
IRF3-223ENST00000599223 OXA1LQ15070 435 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 PSG5Q15238 335 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 RNASE12Q5GAN4 147 aaKnown RBP11.26□□□□□ -0.61
IRF3-223ENST00000599223 UNQ5815/PRO19632Q6UWF5 114 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 MOB1BQ7L9L4 216 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 TCTEX1D1Q8N7M0 179 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 ZNF383Q8NA42 475 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 LFNGQ8NES3 379 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 C11orf54Q9H0W9 315 aaPredicted RBP11.26□□□□□ -0.61
IRF3-223ENST00000599223 LPAR5Q9H1C0 372 aa11.26□□□□□ -0.61
IRF3-223ENST00000599223 METTL1Q9UBP6 276 aaKnown RBP11.26□□□□□ -0.61
IRF3-223ENST00000599223 HYDINQ4G0P3 5121 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 TRBV6-6A0A0A6YYG2 114 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 IGKV1-6A0A0C4DH72 117 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 FOXI3A8MTJ6 420 aaPredicted RBP11.25□□□□□ -0.61
IRF3-223ENST00000599223 ARPC1BO15143 372 aaKnown RBP11.25□□□□□ -0.61
IRF3-223ENST00000599223 LYRM1O43325 122 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 GSTP1P09211 210 aaKnown RBP11.25□□□□□ -0.61
IRF3-223ENST00000599223 CD3GP09693 182 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 VEGFCP49767 419 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 Q8N1Y9 231 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 OR10R2Q8NGX6 335 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 GRPEL2Q8TAA5 225 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 DEDD2Q8WXF8 326 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 RAB3CQ96E17 227 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 TM2D3Q9BRN9 247 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 AUNIPQ9H7T9 357 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 RNF150Q9ULK6 438 aa11.25□□□□□ -0.61
IRF3-223ENST00000599223 BIRC6Q9NR09 4857 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 FAM240BA0A1B0GVZ2 78 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 NAP1L6A6NFF2 107 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 ITGB1BP1O14713 200 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 HSPB1P04792 205 aaKnown RBP11.24□□□□□ -0.61
IRF3-223ENST00000599223 SCTP09683 121 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 IGHV4-30-4P0DP06 118 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 MRPS15P82914 257 aaKnown RBP11.24□□□□□ -0.61
IRF3-223ENST00000599223 PLA2G7Q13093 441 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 DYRK1AQ13627 763 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 AKIRIN2Q53H80 203 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 Q6ZNX1 250 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 OR52I2Q8NH67 350 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 TRIM63Q969Q1 353 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 RHOVQ96L33 236 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 PLEKHJ1Q9NW61 149 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 TBC1D24Q9ULP9 559 aa11.24□□□□□ -0.61
IRF3-223ENST00000599223 SLC25A17O43808 307 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 IGLV1-51P01701 117 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 TRGV3P03979 118 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 LYL1P12980 280 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 MC5RP33032 325 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 CEACAM6P40199 344 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 GNG2P59768 71 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 CDNFQ49AH0 187 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 ZFAND6Q6FIF0 208 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 ZNF562Q6V9R5 426 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 C5orf30Q96GV9 206 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 OR4C12Q96R67 309 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 CITED4Q96RK1 184 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 RSRP1Q9BUV0 290 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 Q9N2K0 584 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 IFT46Q9NQC8 304 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 COPZ2Q9P299 210 aa11.23□□□□□ -0.61
IRF3-223ENST00000599223 LCE6AA0A183 80 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 RAB27BO00194 218 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 HSPA12AO43301 675 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 SPDEFO95238 335 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 IGLV2-23P01705 113 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 ZBTB25P24278 435 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 RCVRNP35243 200 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 CBX5P45973 191 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 TMEM267Q0VDI3 215 aaPredicted RBP11.22□□□□□ -0.61
IRF3-223ENST00000599223 PJVKQ0ZLH3 352 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 ARFRP1Q13795 201 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 PLET1Q6UQ28 207 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 FAM89BQ8N5H3 189 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 EDARADDQ8WWZ3 215 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 FLYWCH2Q96CP2 140 aaKnown RBP11.22□□□□□ -0.61
IRF3-223ENST00000599223 ARHGAP5-AS1Q96IT6 56 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 GHITMQ9H3K2 345 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 SLA2Q9H6Q3 261 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 EDA2RQ9HAV5 297 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms