RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 CDK10Q15131 360 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 VMA21Q3ZAQ7 101 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 HES5Q5TA89 166 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 PHB2Q99623 299 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 NEURL2Q9BR09 285 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 PLEKHA3Q9HB20 300 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 A0A0B4J203 849 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 A0A1B0GW64 132 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 TEX22C9J3V5 150 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 E7EUB6 86 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 LGALS9O00182 355 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 HSMCR30P0CW71 290 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 CRHBPP24387 322 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 KIR2DS2P43631 304 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 OR10A3P58181 314 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 BRWD1-AS2P59051 145 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 RPL30P62888 115 aaKnown RBP8.83□□□□□ -1
CLIP3-204ENST00000590559 ATP5G2Q06055 141 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 EIF4EBP1Q13541 118 aaPredicted RBP8.83□□□□□ -1
CLIP3-204ENST00000590559 SSX1Q16384 188 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 PRSS48Q7RTY5 328 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 DEFB125Q8N687 156 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 NECAP1Q8NC96 275 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 IL17DQ8TAD2 202 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 KCTD12Q96CX2 325 aaKnown RBP8.83□□□□□ -1
CLIP3-204ENST00000590559 MGLLQ99685 303 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 SPIN2AQ99865 258 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 SPIN2BQ9BPZ2 258 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 FAM110AQ9BQ89 295 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 CENPOQ9BU64 300 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 WFDC10AQ9H1F0 79 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 ACOT13Q9NPJ3 140 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 ELF5Q9UKW6 265 aaPredicted RBP8.83□□□□□ -1
CLIP3-204ENST00000590559 TPRKBQ9Y3C4 175 aa8.83□□□□□ -1
CLIP3-204ENST00000590559 C2orf70A6NJV1 201 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 IFITM5A6NNB3 132 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 RGS10O43665 173 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 HLA-DQB1P01920 261 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 FOLR2P14207 255 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 AQP4P55087 323 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 MRPS15P82914 257 aaKnown RBP8.82□□□□□ -1
CLIP3-204ENST00000590559 FAM209BQ5JX69 171 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 C10orf55Q5SWW7 151 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 NR2C2APQ86WQ0 139 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 GPHB5Q86YW7 130 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 MMD2Q8IY49 270 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 ZNF645Q8N7E2 425 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 NRG4Q8WWG1 115 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 ACOT12Q8WYK0 555 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 FANCD2OSQ96PS1 177 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 ZNF257Q9Y2Q1 563 aa8.82□□□□□ -1
CLIP3-204ENST00000590559 NPIPB5A8MRT5 1133 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 OR11H12B2RN74 326 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 PPP5D1E7EU14 171 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 TUSC2O75896 110 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 JTBO76095 146 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 TPPPO94811 219 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 CRYGCP07315 174 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 IL6RP08887 468 aaPredicted RBP8.81□□□□□ -1
CLIP3-204ENST00000590559 ZNF735P0CB33 412 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 DTYMKP23919 212 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 GADD45AP24522 165 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 MAP2K4P45985 399 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 C15orf32Q32M92 178 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 PUSL1Q8N0Z8 303 aaKnown RBP8.81□□□□□ -1
CLIP3-204ENST00000590559 CCDC140Q96MF4 163 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 GINS4Q9BRT9 223 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 OR51E2Q9H255 320 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 VCXQ9H320 206 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 SLC2A8Q9NY64 477 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 TECRQ9NZ01 308 aaKnown RBP8.81□□□□□ -1
CLIP3-204ENST00000590559 OR2W1Q9Y3N9 320 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 VPS13DQ5THJ4 4388 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 HECTD4Q9Y4D8 3996 aa8.81□□□□□ -1
CLIP3-204ENST00000590559 A0A075B6Q4 140 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 IGKV1D-13A0A0B4J2D9 117 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 HMX3A6NHT5 357 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 A8MWP6 167 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 MPPED1O15442 326 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 CREBL2O60519 120 aaPredicted RBP8.8□□□□□ -1
CLIP3-204ENST00000590559 FCGR3BO75015 233 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 GGCTO75223 188 aaKnown RBP8.8□□□□□ -1
CLIP3-204ENST00000590559 OR2J3O76001 311 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 KBTBD11O94819 623 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 HLA-AP01891 365 aaKnown RBP8.8□□□□□ -1
CLIP3-204ENST00000590559 IGKV1-13P0DP09 117 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 TBCEQ15813 527 aaPredicted RBP8.8□□□□□ -1
CLIP3-204ENST00000590559 C19orf35Q6ZS72 473 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 SLC25A42Q86VD7 318 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 TMEM167AQ8TBQ9 72 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 WDR89Q96FK6 387 aaPredicted RBP8.8□□□□□ -1
CLIP3-204ENST00000590559 SRD5A3Q9H8P0 318 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 NDUFB11Q9NX14 153 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 RBMX2Q9Y388 322 aaKnown RBP8.8□□□□□ -1
CLIP3-204ENST00000590559 RBM7Q9Y580 266 aaKnown RBP8.8□□□□□ -1
CLIP3-204ENST00000590559 DNAH6Q9C0G6 4158 aa8.8□□□□□ -1
CLIP3-204ENST00000590559 TRDV1A0A1B0GX56 115 aa8.79□□□□□ -1
CLIP3-204ENST00000590559 TMEM213A2RRL7 107 aa8.79□□□□□ -1
CLIP3-204ENST00000590559 ERICH4A6NGS2 130 aa8.79□□□□□ -1
CLIP3-204ENST00000590559 CGB1A6NKQ9 187 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms