RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SEBOXQ9HB31 216 aaPredicted RBP20.57■□□□□ 0.88
RAB40C-204ENST00000538492 SDF2L1Q9HCN8 221 aa20.57■□□□□ 0.88
RAB40C-204ENST00000538492 YLPM1P49750 1951 aaKnown RBP20.57■□□□□ 0.88
RAB40C-204ENST00000538492 MBP02144 154 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 CGB3P0DN86 165 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 CGB7P0DN87 165 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 CD40P25942 277 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 ERVK-16P61578 105 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 CT45A1Q5HYN5 189 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 C1QL4Q86Z23 238 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 CT45A3Q8NHU0 189 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 RAB24Q969Q5 203 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 METTL1Q9UBP6 276 aaKnown RBP20.56■□□□□ 0.88
RAB40C-204ENST00000538492 CXorf65A6NEN9 183 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 B4DEV8 164 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 GATA4P43694 442 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 HEYLQ9NQ87 328 aaPredicted RBP20.56■□□□□ 0.88
RAB40C-204ENST00000538492 DCAF16Q9NXF7 216 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 ADGRG4Q8IZF6 3080 aa20.56■□□□□ 0.88
RAB40C-204ENST00000538492 ROS1P08922 2347 aa20.55■□□□□ 0.88
RAB40C-204ENST00000538492 SMCO3A2RU48 225 aa20.55■□□□□ 0.88
RAB40C-204ENST00000538492 PNRC1Q12796 327 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-204ENST00000538492 WDR25Q64LD2 544 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-204ENST00000538492 CCL13Q99616 98 aa20.55■□□□□ 0.88
RAB40C-204ENST00000538492 ACTR3CQ9C0K3 210 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-204ENST00000538492 TMEM140Q9NV12 185 aa20.55■□□□□ 0.88
RAB40C-204ENST00000538492 CYB5BO43169 146 aa20.55■□□□□ 0.88
RAB40C-204ENST00000538492 CD1BP29016 333 aa20.55■□□□□ 0.88
RAB40C-204ENST00000538492 NUBP1P53384 320 aa20.55■□□□□ 0.88
RAB40C-204ENST00000538492 SPCS3P61009 180 aa20.55■□□□□ 0.88
RAB40C-204ENST00000538492 IL19Q9UHD0 177 aa20.55■□□□□ 0.88
RAB40C-204ENST00000538492 DYSFO75923 2080 aa20.55■□□□□ 0.88
RAB40C-204ENST00000538492 PCNX1Q96RV3 2341 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 SAA2-SAA4A0A096LPE2 208 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 AP4M1O00189 453 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 RRHO14718 337 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 GYPAP02724 150 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 SAA2P0DJI9 122 aaPredicted RBP20.54■□□□□ 0.88
RAB40C-204ENST00000538492 MDKP21741 143 aaPredicted RBP20.54■□□□□ 0.88
RAB40C-204ENST00000538492 CCKARP32238 428 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 PSMB3P49720 205 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 RELBQ01201 579 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 FAM216BQ8N7L0 139 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 FAM222BQ8WU58 562 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 SMIM7Q9BQ49 75 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 GFOD1Q9NXC2 390 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 KBTBD11-OT1A0A1B0GTJ5 212 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 KIAA0141Q14154 515 aaPredicted RBP20.54■□□□□ 0.88
RAB40C-204ENST00000538492 KRTCAP3Q53RY4 240 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 GCSAMLQ5JQS6 135 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 STUMQ69YW2 141 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 RPUSD4Q96CM3 377 aaKnown RBP20.54■□□□□ 0.88
RAB40C-204ENST00000538492 DCHS1Q96JQ0 3298 aa20.54■□□□□ 0.88
RAB40C-204ENST00000538492 C17orf112F2Z3M2 114 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 RBFOX2O43251 390 aaKnown RBP eCLIP20.53■□□□□ 0.882e-11■■□□□ 12.3
RAB40C-204ENST00000538492 AARDQ4LEZ3 155 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 SLC16A13Q7RTY0 426 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 SSX3Q99909 188 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 KALRNO60229 2985 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 TRGV10A0A0A0MS01 117 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 NCMAPQ5T1S8 102 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 LYG1Q8N1E2 194 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 ABHD12Q8N2K0 398 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 Q8N7P7 452 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 DDB2Q92466 427 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 SNRNP40Q96DI7 357 aaKnown RBP20.53■□□□□ 0.88
RAB40C-204ENST00000538492 SDSLQ96GA7 329 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 GAFA1Q96PS6 74 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 SH3BGRL2Q9UJC5 107 aa20.53■□□□□ 0.88
RAB40C-204ENST00000538492 FAM90A9PA6NNJ1 464 aa20.52■□□□□ 0.88
RAB40C-204ENST00000538492 GNG10P50151 68 aa20.52■□□□□ 0.88
RAB40C-204ENST00000538492 PMS2P11Q13670 270 aa20.52■□□□□ 0.88
RAB40C-204ENST00000538492 TCF23Q7RTU1 214 aa20.52■□□□□ 0.88
RAB40C-204ENST00000538492 RAB7AP51149 207 aa20.52■□□□□ 0.88
RAB40C-204ENST00000538492 CCL8P80075 99 aa20.52■□□□□ 0.88
RAB40C-204ENST00000538492 OR4F5Q8NH21 305 aa20.52■□□□□ 0.88
RAB40C-204ENST00000538492 OR4F4Q96R69 305 aa20.52■□□□□ 0.88
RAB40C-204ENST00000538492 WDR83OSQ9Y284 106 aa20.52■□□□□ 0.88
RAB40C-204ENST00000538492 ADIRFQ15847 76 aa20.51■□□□□ 0.87
RAB40C-204ENST00000538492 OR4S2Q8NH73 311 aa20.51■□□□□ 0.87
RAB40C-204ENST00000538492 MUC6Q6W4X9 2439 aa20.51■□□□□ 0.87
RAB40C-204ENST00000538492 TRAV38-1A0A0B4J264 116 aa20.51■□□□□ 0.87
RAB40C-204ENST00000538492 A0A0G2JNJ9 132 aa20.51■□□□□ 0.87
RAB40C-204ENST00000538492 VDAC2P45880 294 aaPredicted RBP20.51■□□□□ 0.87
RAB40C-204ENST00000538492 ZCCHC24Q8N2G6 241 aaKnown RBP20.51■□□□□ 0.87
RAB40C-204ENST00000538492 FAM216AQ8WUB2 273 aa20.51■□□□□ 0.87
RAB40C-204ENST00000538492 Q9UFV3 132 aa20.51■□□□□ 0.87
RAB40C-204ENST00000538492 CLDN34H7C241 214 aa20.5■□□□□ 0.87
RAB40C-204ENST00000538492 GFRA3O60609 400 aa20.5■□□□□ 0.87
RAB40C-204ENST00000538492 PAGE4O60829 102 aa20.5■□□□□ 0.87
RAB40C-204ENST00000538492 MMP23AO75900 390 aa20.5■□□□□ 0.87
RAB40C-204ENST00000538492 TNFSF4P23510 183 aa20.5■□□□□ 0.87
RAB40C-204ENST00000538492 CDC34P49427 236 aaPredicted RBP20.5■□□□□ 0.87
RAB40C-204ENST00000538492 DOLPP1Q86YN1 238 aa20.5■□□□□ 0.87
RAB40C-204ENST00000538492 ABHD17AQ96GS6 310 aa20.5■□□□□ 0.87
RAB40C-204ENST00000538492 S100A8P05109 93 aa20.5■□□□□ 0.87
RAB40C-204ENST00000538492 WFDC8Q8IUA0 241 aa20.5■□□□□ 0.87
RAB40C-204ENST00000538492 NANPQ8TBE9 248 aa20.5■□□□□ 0.87
RAB40C-204ENST00000538492 RHOVQ96L33 236 aa20.5■□□□□ 0.87
RAB40C-204ENST00000538492 RPP30P78346 268 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms