RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ALDH3B2P48448 385 aa13.3□□□□□ -0.28
SFSWAP-205ENST00000537164 RORCP51449 518 aa13.3□□□□□ -0.28
SFSWAP-205ENST00000537164 RAB25P57735 213 aa13.3□□□□□ -0.28
SFSWAP-205ENST00000537164 C9orf66Q5T8R8 295 aa13.3□□□□□ -0.28
SFSWAP-205ENST00000537164 OR4S2Q8NH73 311 aa13.3□□□□□ -0.28
SFSWAP-205ENST00000537164 IFT46Q9NQC8 304 aa13.3□□□□□ -0.28
SFSWAP-205ENST00000537164 CCL28Q9NRJ3 127 aa13.3□□□□□ -0.28
SFSWAP-205ENST00000537164 COMMD3Q9UBI1 195 aa13.3□□□□□ -0.28
SFSWAP-205ENST00000537164 RBFOX2O43251 390 aaKnown RBP eCLIP13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 CREBL2O60519 120 aaPredicted RBP13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 KIR2DS2P43631 304 aa13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 TPPP2P59282 170 aa13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 DYRK1AQ13627 763 aa13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 IDO2Q6ZQW0 420 aa13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 MMD2Q8IY49 270 aa13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 GPX8Q8TED1 209 aa13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 SECTM1Q8WVN6 248 aa13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 TCTEX1D2Q8WW35 142 aa13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 SRSF12Q8WXF0 261 aaKnown RBP13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 OR5B12Q96R08 314 aa13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 ZNF430Q9H8G1 570 aaPredicted RBP13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 TAS2R8Q9NYW2 309 aa13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 SCOCQ9UIL1 159 aa13.29□□□□□ -0.28
SFSWAP-205ENST00000537164 SMIM31A0A1B0GVY4 71 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 LINC01619G3V211 115 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 RAMP3O60896 148 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 TRGV3P03979 118 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 ELK1P19419 428 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 INSL3P51460 131 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 TAS2R46P59540 309 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 LYSMD2Q8IV50 215 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 PUSL1Q8N0Z8 303 aaKnown RBP13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 OR5T1Q8NG75 326 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 VSTM2AQ8TAG5 236 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 BORCS5Q969J3 196 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 MS4A10Q96PG2 267 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 DCUN1D5Q9BTE7 237 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 TINAGL1Q9GZM7 467 aaPredicted RBP13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 SLC5A7Q9GZV3 580 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 ALX4Q9H161 411 aaPredicted RBP13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 SCPEP1Q9HB40 452 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 ADAM30Q9UKF2 790 aa13.28□□□□□ -0.28
SFSWAP-205ENST00000537164 A0A0G2JLM5 398 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 WI2-2373I1.2A0A1W2PRP0 233 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 MSGN1A6NI15 193 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 SEC14L6B5MCN3 397 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 HSPB1P04792 205 aaKnown RBP13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 FCER2P06734 321 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 ZNF182P17025 639 aaPredicted RBP13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 RFX2P48378 723 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 TNXAQ16473 311 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 OR2B11Q5JQS5 317 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 GPR107Q5VW38 600 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 ZNF818PQ6ZRF7 136 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 TMEM167AQ8TBQ9 72 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 AP3S1Q92572 193 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 MOB3AQ96BX8 217 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 GPHA2Q96T91 129 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 EHFQ9NZC4 300 aa13.27□□□□□ -0.29
SFSWAP-205ENST00000537164 IGHV4OR15-8A0A075B7B6 117 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 A0A087WW49 117 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 SULT1C2O00338 296 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 HPGDSO60760 199 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 TPPPO94811 219 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 KBTBD11O94819 623 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 OR2A4O95047 310 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 HRASP01112 189 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 GNRHRP30968 328 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 DGCR2P98153 550 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 MZT2AQ6P582 158 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 VKORC1L1Q8N0U8 176 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 ADAD2Q8NCV1 583 aaKnown RBP13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 DCUN1D4Q92564 292 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 DLX4Q92988 240 aaPredicted RBP13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 OR2A7Q96R45 310 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 SPIN2AQ99865 258 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 SPIN2BQ9BPZ2 258 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 AIFM2Q9BRQ8 373 aa13.26□□□□□ -0.29
SFSWAP-205ENST00000537164 OVOL1O14753 267 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 TNFSF12O43508 249 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 ACTL6BO94805 426 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 IGHV3-11P01762 117 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 OR9G9P0C7N8 305 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 MAS1LP35410 378 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 FXYD4P59646 89 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 HERV-K104P61576 105 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 CATR1Q13166 79 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 POU2AF1Q16633 256 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 GPR141Q7Z602 305 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 SPAG16Q8N0X2 631 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 OR5H2Q8NGV7 314 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 USMG5Q96IX5 58 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 PHB2Q99623 299 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 ZNF2Q9BSG1 426 aaPredicted RBP13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 ZNF355PQ9NSJ1 428 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 BET1LQ9NYM9 111 aa13.25□□□□□ -0.29
SFSWAP-205ENST00000537164 TRBV9A0A0B4J1U6 114 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 HPRT1P00492 218 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 PMP2P02689 132 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 IL6RP08887 468 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms