RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 JPT2Q9H910 190 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 EXOSC4Q9NPD3 245 aaKnown RBP2.73□□□□□ -1.97
CSMD3-210ENST00000534172 UQCR10Q9UDW1 63 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 BTRCQ9Y297 605 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 LAMTOR2Q9Y2Q5 125 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 MRPS16Q9Y3D3 137 aaKnown RBP2.73□□□□□ -1.97
CSMD3-210ENST00000534172 CACNA1HO95180 2353 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 A0A1B0GU03 582 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 NAP1L6A6NFF2 107 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 SMIM9A6NGZ8 99 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 FAM166BA8MTA8 275 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 F5H5P2 479 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF593O00488 134 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-210ENST00000534172 GABRPO00591 440 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 CREBL2O60519 120 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-210ENST00000534172 FOXH1O75593 365 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 TRAPPC6AO75865 159 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 HAND1O96004 215 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 TIMP1P01033 207 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 ISG15P05161 165 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 PGA3P0DJD8 388 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 RPL34P49207 117 aaKnown RBP2.73□□□□□ -1.97
CSMD3-210ENST00000534172 GNG4P50150 75 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 AKR1C1Q04828 323 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 DHRS2Q13268 280 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 TIMM23BQ5SRD1 257 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 TEX43Q6ZNM6 134 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 VKORC1L1Q8N0U8 176 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 ARIH2OSQ8N7S6 290 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 ZFP41Q8N8Y5 198 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 WDR31Q8NA23 367 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 C5orf17Q8NAS9 161 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 VN1R17PQ8TDU5 208 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF418Q8TF45 676 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-210ENST00000534172 MUCL1Q96DR8 90 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 TSPAN32Q96QS1 320 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 CDCA4Q9BXL8 241 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 RSPO3Q9BXY4 272 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-210ENST00000534172 CHIAQ9BZP6 476 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 LPAR5Q9H1C0 372 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 RNF167Q9H6Y7 350 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 DMAC2Q9NW81 257 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 SPRR3Q9UBC9 169 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 MMP17Q9ULZ9 603 aa2.73□□□□□ -1.97
CSMD3-210ENST00000534172 SIP14410 1827 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 TENM4Q6N022 2769 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 SCN9AQ15858 1988 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 EPM2AB3EWF7 344 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 LOC730098B7Z3J9 87 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 SLC17A2O00624 439 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 NME4O00746 187 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 SLC2A10O95528 541 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 CTSDP07339 412 aaPredicted RBP2.72□□□□□ -1.97
CSMD3-210ENST00000534172 TACSTD2P09758 323 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 TRGC1P0CF51 173 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 RBMY1CP0DJD4 496 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 SMIM10L2AP0DMW4 78 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 SMIM10L2BP0DMW5 78 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 PSG2P11465 335 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 HTR1EP28566 365 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 GABRA3P34903 492 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 MARCKSL1P49006 195 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 SSR4P51571 173 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 HNRNPA3P51991 378 aaKnown RBP2.72□□□□□ -1.97
CSMD3-210ENST00000534172 OR12D2P58182 307 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 RPS23P62266 143 aaKnown RBP2.72□□□□□ -1.97
CSMD3-210ENST00000534172 RPL31P62899 125 aaKnown RBP2.72□□□□□ -1.97
CSMD3-210ENST00000534172 SP4Q02446 784 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 HSD52Q0P140 79 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 LRRC10Q5BKY1 277 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF506Q5JVG8 444 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 CPTPQ5TA50 214 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 CD200R1LQ6Q8B3 271 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 TOMM20LQ6UXN7 152 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 CLEC20AQ6ZU45 233 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 FBXO16Q8IX29 292 aaPredicted RBP2.72□□□□□ -1.97
CSMD3-210ENST00000534172 PIANPQ8IYJ0 282 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 TMEM105Q8N8V8 129 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF564Q8TBZ8 553 aaPredicted RBP2.72□□□□□ -1.97
CSMD3-210ENST00000534172 OR5P2Q8WZ92 322 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 TSLPQ969D9 159 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 FLYWCH2Q96CP2 140 aaKnown RBP2.72□□□□□ -1.97
CSMD3-210ENST00000534172 OR10C1Q96KK4 312 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 OR4K3Q96R72 315 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 GPR22Q99680 433 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 VAMP8Q9BV40 100 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 HES7Q9BYE0 225 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 ATG5Q9H1Y0 275 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 ZDHHC11Q9H8X9 412 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 TXNL4BQ9NX01 149 aaKnown RBP2.72□□□□□ -1.97
CSMD3-210ENST00000534172 NDUFB11Q9NX14 153 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 MCTS1Q9ULC4 181 aaKnown RBP2.72□□□□□ -1.97
CSMD3-210ENST00000534172 C2CD3Q4AC94 2353 aa2.72□□□□□ -1.97
CSMD3-210ENST00000534172 PRRC2BQ5JSZ5 2229 aaKnown RBP2.72□□□□□ -1.97
CSMD3-210ENST00000534172 CCL15-CCL14A0A0B4J2E2 113 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 A0A1B0GWB2 263 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF878C9JN71 531 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 H7BYZ3 331 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 DEGS1O15121 323 aa2.71□□□□□ -1.97
CSMD3-210ENST00000534172 MRPS12O15235 138 aaKnown RBP2.71□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms