RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	PROK1	P58294	105 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	TAS2R19	P59542	299 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	AP3S2	P59780	193 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	RELB	Q01201	579 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	TMEM267	Q0VDI3	215 aa	Predicted RBP	5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	DIAPH2-AS1	Q14236	149 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	MEF2D	Q14814	521 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	C2orf68	Q2NKX9	166 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	RNASE10	Q5GAN6	216 aa	Known RBP	5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	SPANXN2	Q5MJ10	180 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	ZNF66	Q6ZN08	573 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	KLHDC1	Q8N7A1	406 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	C5orf56	Q8N8D9	126 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	OR6Q1	Q8NGQ2	317 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	VSTM2A	Q8TAG5	236 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	OSR1	Q8TAX0	266 aa	Predicted RBP	5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	DTD1	Q8TEA8	209 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	GPX8	Q8TED1	209 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	WFDC12	Q8WWY7	111 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	DCUN1D5	Q9BTE7	237 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	SLC5A7	Q9GZV3	580 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	ZNF702P	Q9H963	129 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	BIN3	Q9NQY0	253 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	SDHAF2	Q9NX18	166 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	ZNF107	Q9UII5	783 aa	Predicted RBP	5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	ELF5	Q9UKW6	265 aa	Predicted RBP	5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	PSMB11	A5LHX3	300 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	MEIS3P1	A6NDR6	274 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	FABP12	A6NFH5	140 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	MARCH11	A6NNE9	402 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340		H0YJW9	148 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	CTDSPL	O15194	276 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	TUSC2	O75896	110 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	CNIH1	O95406	144 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	HRAS	P01112	189 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	CT45A6	P0DMU7	189 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	CT45A5	P0DMU8	189 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	CT45A7	P0DMV0	189 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	SLC6A1	P30531	599 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	ECI1	P42126	302 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	INPP1	P49441	399 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	FXYD4	P59646	89 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	BLCAP	P62952	87 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	C5orf64	Q2M2E5	130 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	UTF1	Q5T230	341 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	DHRS11	Q6UWP2	260 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	KCTD9	Q7L273	389 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	SSX9	Q7RTT3	188 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	OVCH2	Q7RTZ1	564 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	ODF3L1	Q8IXM7	274 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	ARRDC1	Q8N5I2	433 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	GVQW1	Q8N7I0	195 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	TCTEX1D1	Q8N7M0	179 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	NPB	Q8NG41	125 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	OR5T1	Q8NG75	326 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	OR4S2	Q8NH73	311 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	ABHD5	Q8WTS1	349 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	SECTM1	Q8WVN6	248 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	TCTEX1D2	Q8WW35	142 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	HARBI1	Q96MB7	349 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	SCGB3A2	Q96PL1	93 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	ZNF2	Q9BSG1	426 aa	Predicted RBP	5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	SAV1	Q9H4B6	383 aa	Predicted RBP	5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	SVEP1	Q4LDE5	3571 aa		5.95	□□□□□ -1.46
NR1I3-231	ENST00000512340	PIGBOS1	A0A0B4J2F0	54 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	MFSD2B	A6NFX1	497 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	DISC1	C4P0D8	188 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340		J3QRK9	145 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	RRH	O14718	337 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	ATG12	O94817	140 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	PTTG1	O95997	202 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	IGHG2	P01859	326 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	HLA-DRB1	P01911	266 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	PMP2	P02689	132 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	AADAC	P22760	399 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	HLA-DMA	P28067	261 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	HRH1	P35367	487 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	RPL35	P42766	123 aa	Known RBP	5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	AKR1D1	P51857	326 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	ERVK-16	P61578	105 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	CXorf66	Q5JRM2	361 aa	Predicted RBP	5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	KHDC1L	Q5JSQ8	128 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	ZNF660	Q6AZW8	331 aa	Predicted RBP	5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	FAM53A	Q6NSI3	398 aa	Predicted RBP	5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	TEX38	Q6PEX7	206 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340		Q6ZPA2	131 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	LAX1	Q8IWV1	398 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340		Q8N6K4	173 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340		Q8N9W7	124 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	CLRN3	Q8NCR9	226 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	BVES	Q8NE79	360 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	OR4F17	Q8NGA8	305 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	OR5AU1	Q8NGC0	362 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	ZFAND1	Q8TCF1	268 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	OR4F4	Q96R69	305 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	CITED1	Q99966	193 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	PARP12	Q9H0J9	701 aa	Known RBP	5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	METTL1	Q9UBP6	276 aa	Known RBP	5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	MTFP1	Q9UDX5	166 aa		5.94	□□□□□ -1.46
NR1I3-231	ENST00000512340	SCP2D1	Q9UJQ7	156 aa		5.94	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms