RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 ATP8B1O43520 1251 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 MT-CO2P00403 227 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 HLA-DQB2P05538 268 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 RAB14P61106 215 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 HPCAP84074 193 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 AKR1C1Q04828 323 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 SYCP1Q15431 976 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 CLEC12BQ2HXU8 276 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 FBXO48Q5FWF7 155 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 C10orf55Q5SWW7 151 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.29□□□□□ -2.36
SMAD1-203ENST00000502342 SPATA24Q86W54 205 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 UMODL1-AS1Q8N2C9 162 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 TESCQ96BS2 214 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 SIKE1Q9BRV8 207 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 MROQ9BYG7 248 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 CD300AQ9UGN4 299 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 NAT8Q9UHE5 227 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 PCYT1BQ9Y5K3 369 aaPredicted RBP0.29□□□□□ -2.36
SMAD1-203ENST00000502342 SETD5Q9C0A6 1442 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 GREB1Q4ZG55 1949 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 EIF4G1Q04637 1599 aaKnown RBP0.28□□□□□ -2.36
SMAD1-203ENST00000502342 TMEM269A0A1B0GVZ9 245 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 ATP5G1P05496 136 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 UBBP0CG47 229 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 MSNP26038 577 aaKnown RBP0.28□□□□□ -2.36
SMAD1-203ENST00000502342 GRPRP30550 384 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 SLCO1A2P46721 670 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 HAAOP46952 286 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 KCNJ3P48549 501 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 SNAP25P60880 206 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 FAM27BQ5VT28 67 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 RASSF6Q6ZTQ3 369 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 ZNF565Q8N9K5 539 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 SPERTQ8NA61 448 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 ZNF439Q8NDP4 499 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 OR52E4Q8NGH9 312 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 RAB2BQ8WUD1 216 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 SERPINI1Q99574 410 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 TMEM109Q9BVC6 243 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 CFAP45Q9UL16 551 aa0.28□□□□□ -2.36
SMAD1-203ENST00000502342 SMARCA4P51532 1647 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 USP24Q9UPU5 2620 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 GOLGA8QA0A0J9YX86 632 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 OR51F1A6NGY5 319 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 TMEM212A6NML5 194 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 C9JCJ5 164 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 SDCBPO00560 298 aaPredicted RBP0.27□□□□□ -2.37
SMAD1-203ENST00000502342 ITGB1BP1O14713 200 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 ATP6V1G2O95670 118 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 GP1BAP07359 652 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 SYT1P21579 422 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 FABP5Q01469 135 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 BLIDQ8IZY5 108 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 RPP25LQ8N5L8 163 aaKnown RBP0.27□□□□□ -2.37
SMAD1-203ENST00000502342 C12orf29Q8N999 325 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 OR5AK3PQ8NH89 298 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 STOML3Q8TAV4 291 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 PPCDCQ96CD2 204 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 CHST6Q9GZX3 395 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 TMEM94Q12767 1356 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 ABCC12Q96J65 1359 aa0.27□□□□□ -2.37
SMAD1-203ENST00000502342 NCOA6Q14686 2063 aaPredicted RBP0.26□□□□□ -2.37
SMAD1-203ENST00000502342 TRAV14DV4A0A0A6YYC5 116 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 LOC100506127A0A0U1RQW1 187 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 IBA57-AS1B1ANH7 110 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 STX10O60499 249 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 NEMFO60524 1076 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 IVLP07476 585 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 MSMBP08118 114 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 TFPTP0C1Z6 253 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 CXCL2P19875 107 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 CXCL3P19876 107 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 FKBP1AP62942 108 aaKnown RBP0.26□□□□□ -2.37
SMAD1-203ENST00000502342 NDUFA5Q16718 116 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 Q3ZCU0 254 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 DNAL1Q4LDG9 190 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 ACSM3Q53FZ2 586 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 TEX36Q5VZQ5 186 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 KRTAP19-3Q7Z4W3 81 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 GPHB5Q86YW7 130 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 OR8B3Q8NGG8 313 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 ACOT12Q8WYK0 555 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 TIPINQ9BVW5 301 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 NSRP1Q9H0G5 558 aaKnown RBP0.26□□□□□ -2.37
SMAD1-203ENST00000502342 TRABDQ9H4I3 376 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 OR5AC2Q9NZP5 309 aa0.26□□□□□ -2.37
SMAD1-203ENST00000502342 A0A1W2PP64 1363 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 SYNRGQ9UMZ2 1314 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 TRBV6-7A0A0A0MS04 114 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 TMED7-TICAM2A0A0A6YYA0 188 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 C5orf49A4QMS7 147 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 TRAPPC2LH3BP13 241 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 ADAP1O75689 374 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 S100A9P06702 114 aaKnown RBP0.25□□□□□ -2.37
SMAD1-203ENST00000502342 MIPP30301 263 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 RPL30P62888 115 aaKnown RBP0.25□□□□□ -2.37
SMAD1-203ENST00000502342 HLA-DRB3P79483 266 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 EBPQ15125 230 aaKnown RBP0.25□□□□□ -2.37
SMAD1-203ENST00000502342 ZNHIT3Q15649 155 aaPredicted RBP0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms