RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 RBPMSQ93062 196 aaKnown RBP7.01□□□□□ -1.29
U2AF1-212ENST00000496462 SLC2A8Q9NY64 477 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 NDUFB6O95139 128 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 HIST1H1BP16401 226 aaKnown RBP7□□□□□ -1.29
U2AF1-212ENST00000496462 RPL8P62917 257 aaKnown RBP7□□□□□ -1.29
U2AF1-212ENST00000496462 HOXA4Q00056 320 aaPredicted RBP7□□□□□ -1.29
U2AF1-212ENST00000496462 Q8N7P7 452 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 DCUN1D4Q92564 292 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 NABP2Q9BQ15 211 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 MEGF9Q9H1U4 602 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 AKIP1Q9NQ31 210 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 ZNRD1Q9P1U0 126 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 RNF114Q9Y508 228 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 A0A0G2JLM5 398 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 SLC25A17O43808 307 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 PGLYRP1O75594 196 aaPredicted RBP7□□□□□ -1.29
U2AF1-212ENST00000496462 ETFRF1Q6IPR1 90 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 UNQ5815/PRO19632Q6UWF5 114 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 GLDNQ6ZMI3 551 aaPredicted RBP7□□□□□ -1.29
U2AF1-212ENST00000496462 THAP6Q8TBB0 222 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 EAF1Q96JC9 268 aaPredicted RBP7□□□□□ -1.29
U2AF1-212ENST00000496462 CCR6P51684 374 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 C9orf139Q6ZV77 190 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 LDLRAD3Q86YD5 345 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 IL22RA2Q969J5 263 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 COA4Q9NYJ1 87 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 V9GYH0 126 aa7□□□□□ -1.29
U2AF1-212ENST00000496462 RRHO14718 337 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 IFNA10P01566 189 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 HOXB5P09067 269 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 RAG2P55895 527 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 FGL1Q08830 312 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 ECSCRQ19T08 205 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 ZNF833PQ6ZTB9 187 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 LHFPL4Q7Z7J7 247 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 C20orf85Q9H1P6 137 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 NSD1Q96L73 2696 aaPredicted RBP6.99□□□□□ -1.29
U2AF1-212ENST00000496462 FOXI3A8MTJ6 420 aaPredicted RBP6.99□□□□□ -1.29
U2AF1-212ENST00000496462 IFNA4P05014 189 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 TRAPPC2P0DI81 140 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 TRAPPC2BP0DI82 140 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 S100A10P60903 97 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 KLF9Q13886 244 aaPredicted RBP6.99□□□□□ -1.29
U2AF1-212ENST00000496462 FXYD3Q14802 87 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 Q6YL49 198 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 LYG2Q86SG7 212 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 RSRP1Q9BUV0 290 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 ZMAT5Q9UDW3 170 aaKnown RBP6.99□□□□□ -1.29
U2AF1-212ENST00000496462 VENTXO95231 258 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 SFT2D2O95562 160 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 VSIG10L2P0DP72 767 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 PF4V1P10720 104 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 MMP9P14780 707 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 PI3P19957 117 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 DUTP33316 252 aaKnown RBP6.99□□□□□ -1.29
U2AF1-212ENST00000496462 DLX6P56179 175 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 HILS1P60008 231 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 PRB3Q04118 309 aaPredicted RBP6.99□□□□□ -1.29
U2AF1-212ENST00000496462 KRTAP1-3Q8IUG1 177 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 IFI27L2Q9H2X8 130 aa6.99□□□□□ -1.29
U2AF1-212ENST00000496462 KBTBD11O94819 623 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 IGLV1-47P01700 117 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 CGB3P0DN86 165 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 CGB7P0DN87 165 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 LOXL3P58215 753 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 UBE2KP61086 200 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 ZNF431Q8TF32 576 aaPredicted RBP6.98□□□□□ -1.29
U2AF1-212ENST00000496462 MGAT4CQ9UBM8 478 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 ELF5Q9UKW6 265 aaPredicted RBP6.98□□□□□ -1.29
U2AF1-212ENST00000496462 GPR132Q9UNW8 380 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 ODF3BA8MYP8 253 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 CORTO00230 105 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 ATP5IP56385 69 aaPredicted RBP6.98□□□□□ -1.29
U2AF1-212ENST00000496462 C5orf64Q2M2E5 130 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 PPP1R27Q86WC6 154 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 STX12Q86Y82 276 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 ARPC1AQ92747 370 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 GPR61Q9BZJ8 451 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 SLC25A31Q9H0C2 315 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 TOLLIPQ9H0E2 274 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 RNF24Q9Y225 148 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 A0A0B4J2A0 478 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 IL5P05113 134 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 AP2S1P53680 142 aaPredicted RBP6.98□□□□□ -1.29
U2AF1-212ENST00000496462 FOXB2Q5VYV0 432 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 SLC35E1Q96K37 410 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 RBM14Q96PK6 669 aaKnown RBP6.98□□□□□ -1.29
U2AF1-212ENST00000496462 FBXL15Q9H469 300 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 SHPKQ9UHJ6 478 aa6.98□□□□□ -1.29
U2AF1-212ENST00000496462 COL6A5A8TX70 2615 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 PSMB11A5LHX3 300 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 H0YJW9 148 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 MMP23AO75900 390 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 IGHV4-59P01825 116 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 OR4E1P0C645 316 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 NKX2-1P43699 371 aaPredicted RBP6.97□□□□□ -1.29
U2AF1-212ENST00000496462 EIF5AP63241 154 aaKnown RBP6.97□□□□□ -1.29
U2AF1-212ENST00000496462 TMEM177Q53S58 311 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 FAAP20Q6NZ36 180 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 OR5B3Q8NH48 314 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms