RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 EPG5Q9HCE0 2579 aa21.43■■□□□ 1.02
SHOX2-204ENST00000483851 DNASE2O00115 360 aaPredicted RBP21.43■■□□□ 1.02
SHOX2-204ENST00000483851 TMEM50AO95807 157 aa21.43■■□□□ 1.02
SHOX2-204ENST00000483851 DEFA5Q01523 94 aa21.43■■□□□ 1.02
SHOX2-204ENST00000483851 AARDQ4LEZ3 155 aa21.43■■□□□ 1.02
SHOX2-204ENST00000483851 OR10X1Q8NGY0 326 aa21.43■■□□□ 1.02
SHOX2-204ENST00000483851 SSBP3Q9BWW4 388 aaPredicted RBP21.43■■□□□ 1.02
SHOX2-204ENST00000483851 MALRD1Q5VYJ5 2156 aa21.43■■□□□ 1.02
SHOX2-204ENST00000483851 CT45A6P0DMU7 189 aa21.42■■□□□ 1.02
SHOX2-204ENST00000483851 CT45A5P0DMU8 189 aa21.42■■□□□ 1.02
SHOX2-204ENST00000483851 CT45A7P0DMV0 189 aa21.42■■□□□ 1.02
SHOX2-204ENST00000483851 F2RL1P55085 397 aa21.42■■□□□ 1.02
SHOX2-204ENST00000483851 ABHD12Q8N2K0 398 aa21.42■■□□□ 1.02
SHOX2-204ENST00000483851 AIFM2Q9BRQ8 373 aa21.42■■□□□ 1.02
SHOX2-204ENST00000483851 UQCC1Q9NVA1 299 aa21.42■■□□□ 1.02
SHOX2-204ENST00000483851 IL3RAP26951 378 aa21.41■■□□□ 1.02
SHOX2-204ENST00000483851 PAX9P55771 341 aa21.41■■□□□ 1.02
SHOX2-204ENST00000483851 TNFRSF9Q07011 255 aa21.41■■□□□ 1.02
SHOX2-204ENST00000483851 POU2AF1Q16633 256 aa21.41■■□□□ 1.02
SHOX2-204ENST00000483851 RTL8BQ17RB0 113 aa21.41■■□□□ 1.02
SHOX2-204ENST00000483851 Q6ZRG5 221 aa21.41■■□□□ 1.02
SHOX2-204ENST00000483851 TMEM252Q8N6L7 170 aa21.41■■□□□ 1.02
SHOX2-204ENST00000483851 NDUFS7O75251 213 aa21.41■■□□□ 1.02
SHOX2-204ENST00000483851 LY86O95711 162 aa21.41■■□□□ 1.02
SHOX2-204ENST00000483851 CD5P06127 495 aa21.41■■□□□ 1.02
SHOX2-204ENST00000483851 ST6GALNAC6Q969X2 333 aa21.41■■□□□ 1.02
SHOX2-204ENST00000483851 HRASP01112 189 aa21.4■■□□□ 1.02
SHOX2-204ENST00000483851 PRRX1P54821 245 aa21.4■■□□□ 1.02
SHOX2-204ENST00000483851 NKX6-2Q9C056 277 aaPredicted RBP21.4■■□□□ 1.02
SHOX2-204ENST00000483851 UBE2KP61086 200 aa21.39■■□□□ 1.02
SHOX2-204ENST00000483851 ZNF462Q96JM2 2506 aa21.39■■□□□ 1.02
SHOX2-204ENST00000483851 M0R1W7 72 aa21.39■■□□□ 1.01
SHOX2-204ENST00000483851 BEND2Q8NDZ0 799 aa21.39■■□□□ 1.01
SHOX2-204ENST00000483851 OR5AN1Q8NGI8 311 aa21.39■■□□□ 1.01
SHOX2-204ENST00000483851 TSNAXQ99598 290 aaKnown RBP21.39■■□□□ 1.01
SHOX2-204ENST00000483851 PCGF1Q9BSM1 259 aa21.39■■□□□ 1.01
SHOX2-204ENST00000483851 SEC11CQ9BY50 192 aa21.39■■□□□ 1.01
SHOX2-204ENST00000483851 TMEM231Q9H6L2 316 aa21.39■■□□□ 1.01
SHOX2-204ENST00000483851 SLC35D1Q9NTN3 355 aa21.39■■□□□ 1.01
SHOX2-204ENST00000483851 FAM96BQ9Y3D0 163 aa21.39■■□□□ 1.01
SHOX2-204ENST00000483851 LOC105371242A0A075B767 164 aa21.38■■□□□ 1.01
SHOX2-204ENST00000483851 NXPH3O95157 252 aa21.38■■□□□ 1.01
SHOX2-204ENST00000483851 APOA2P02652 100 aa21.38■■□□□ 1.01
SHOX2-204ENST00000483851 RAB5CP51148 216 aa21.38■■□□□ 1.01
SHOX2-204ENST00000483851 GUCA2BQ16661 112 aa21.38■■□□□ 1.01
SHOX2-204ENST00000483851 ZNF295-AS1Q8N0V1 137 aa21.38■■□□□ 1.01
SHOX2-204ENST00000483851 PUSL1Q8N0Z8 303 aaKnown RBP21.38■■□□□ 1.01
SHOX2-204ENST00000483851 SVBPQ8N300 66 aa21.38■■□□□ 1.01
SHOX2-204ENST00000483851 CLEC7AQ9BXN2 247 aa21.38■■□□□ 1.01
SHOX2-204ENST00000483851 SH3BGRL3Q9H299 93 aa21.38■■□□□ 1.01
SHOX2-204ENST00000483851 TREM1Q9NP99 234 aa21.38■■□□□ 1.01
SHOX2-204ENST00000483851 IGHV2-26A0A0B4J1V2 119 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 C22orf46C9J442 243 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 FAM157AC9JC47 383 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 RNASEK-C17orf49H0YIS7 233 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 TXNL1O43396 289 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 C1orf122Q6ZSJ8 110 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 STX12Q86Y82 276 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 OR52E5Q8NH55 327 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 CIB3Q96Q77 187 aaPredicted RBP21.37■■□□□ 1.01
SHOX2-204ENST00000483851 CCL19Q99731 98 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 LRBAP50851 2863 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 USP9XQ93008 2570 aaPredicted RBP21.37■■□□□ 1.01
SHOX2-204ENST00000483851 IGLV1-47P01700 117 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 SRSF1Q07955 248 aaKnown RBP eCLIP21.37■■□□□ 1.01
SHOX2-204ENST00000483851 ZNRD1Q9P1U0 126 aa21.37■■□□□ 1.01
SHOX2-204ENST00000483851 F8W036 122 aa21.36■■□□□ 1.01
SHOX2-204ENST00000483851 PDLIM3Q53GG5 364 aaPredicted RBP21.36■■□□□ 1.01
SHOX2-204ENST00000483851 OSR1Q8TAX0 266 aaPredicted RBP21.36■■□□□ 1.01
SHOX2-204ENST00000483851 RHOVQ96L33 236 aa21.36■■□□□ 1.01
SHOX2-204ENST00000483851 SCRT1Q9BWW7 348 aa21.36■■□□□ 1.01
SHOX2-204ENST00000483851 RBKSQ9H477 322 aa21.36■■□□□ 1.01
SHOX2-204ENST00000483851 PSENENQ9NZ42 101 aa21.36■■□□□ 1.01
SHOX2-204ENST00000483851 STRAPQ9Y3F4 350 aaKnown RBP21.36■■□□□ 1.01
SHOX2-204ENST00000483851 FAM74A7A6NL05 159 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 TSPAN4O14817 238 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 IGHV2-5P01817 119 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 SULT1A1P50225 295 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 PDLIM4P50479 330 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 ZNF266Q14584 549 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 HLA-DRB5Q30154 266 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 FAM74A3Q4VXF1 159 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 ZNF429Q86V71 674 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 KIR3DL3Q8N743 410 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 HSD17B11Q8NBQ5 300 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 OR4A16Q8NH70 328 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 MRPL20Q9BYC9 149 aaKnown RBP21.35■■□□□ 1.01
SHOX2-204ENST00000483851 TMEM140Q9NV12 185 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 RBMXL2O75526 392 aaKnown RBP21.35■■□□□ 1.01
SHOX2-204ENST00000483851 OR9G9P0C7N8 305 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 COMMD1Q8N668 190 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 NABP2Q9BQ15 211 aa21.35■■□□□ 1.01
SHOX2-204ENST00000483851 AMMECR1Q9Y4X0 333 aaPredicted RBP21.35■■□□□ 1.01
SHOX2-204ENST00000483851 MYO18BQ8IUG5 2567 aa21.34■■□□□ 1.01
SHOX2-204ENST00000483851 H0YJW9 148 aa21.34■■□□□ 1.01
SHOX2-204ENST00000483851 IGHV4-39P01824 125 aa21.34■■□□□ 1.01
SHOX2-204ENST00000483851 MC5RP33032 325 aa21.34■■□□□ 1.01
SHOX2-204ENST00000483851 DVL1P1P54792 670 aaPredicted RBP21.34■■□□□ 1.01
SHOX2-204ENST00000483851 PDPNQ86YL7 162 aa21.34■■□□□ 1.01
SHOX2-204ENST00000483851 TGIF2LXQ8IUE1 241 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms