RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 EHFQ9NZC4 300 aa17.47■□□□□ 0.39
TRAF4-207ENST00000461195 SAA1P0DJI8 122 aaPredicted RBP17.46■□□□□ 0.39
TRAF4-207ENST00000461195 ZNF182P17025 639 aaPredicted RBP17.46■□□□□ 0.39
TRAF4-207ENST00000461195 TAS2R46P59540 309 aa17.46■□□□□ 0.39
TRAF4-207ENST00000461195 MRGPRG-AS1Q2M3A8 158 aa17.46■□□□□ 0.39
TRAF4-207ENST00000461195 OR1N2Q8NGR9 330 aa17.46■□□□□ 0.39
TRAF4-207ENST00000461195 TMEM68Q96MH6 324 aa17.46■□□□□ 0.39
TRAF4-207ENST00000461195 MS4A10Q96PG2 267 aa17.46■□□□□ 0.39
TRAF4-207ENST00000461195 SLA2Q9H6Q3 261 aa17.46■□□□□ 0.39
TRAF4-207ENST00000461195 TNFSF12O43508 249 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 CREBL2O60519 120 aaPredicted RBP17.45■□□□□ 0.38
TRAF4-207ENST00000461195 OR8U8P0C7N1 319 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 KIR2DS2P43631 304 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 RFX2P48378 723 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 TPPP2P59282 170 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 HERV-K104P61576 105 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 ZNF616Q08AN1 781 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 DYRK1AQ13627 763 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 TNXAQ16473 311 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 OR5H2Q8NGV7 314 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 GPX8Q8TED1 209 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 GPHA2Q96T91 129 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 SCPEP1Q9HB40 452 aa17.45■□□□□ 0.38
TRAF4-207ENST00000461195 FAM25AB3EWG3 89 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 FAM25CB3EWG5 89 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 FAM25GB3EWG6 89 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 H3BUA1 57 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 PMP2P02689 132 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 TRGV3P03979 118 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 HOXD3P31249 432 aaPredicted RBP17.44■□□□□ 0.38
TRAF4-207ENST00000461195 BRWD1-AS2P59051 145 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 EGFEM1PQ0D2K5 195 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 DHRS11Q6UWP2 260 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 TMEM17Q86X19 198 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 SNX29P2Q8IUI4 249 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 POC5Q8NA72 575 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 OR5T1Q8NG75 326 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 PHB2Q99623 299 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 ZNF355PQ9NSJ1 428 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 DNAH3Q8TD57 4116 aa17.44■□□□□ 0.38
TRAF4-207ENST00000461195 ACTL6BO94805 426 aa17.43■□□□□ 0.38
TRAF4-207ENST00000461195 LGALS1P09382 135 aaKnown RBP17.43■□□□□ 0.38
TRAF4-207ENST00000461195 KRTAP10-11P60412 298 aa17.43■□□□□ 0.38
TRAF4-207ENST00000461195 ASPHD1Q5U4P2 390 aa17.43■□□□□ 0.38
TRAF4-207ENST00000461195 MMD2Q8IY49 270 aa17.43■□□□□ 0.38
TRAF4-207ENST00000461195 VSTM2AQ8TAG5 236 aa17.43■□□□□ 0.38
TRAF4-207ENST00000461195 MRAPQ8TCY5 172 aa17.43■□□□□ 0.38
TRAF4-207ENST00000461195 BORCS5Q969J3 196 aa17.43■□□□□ 0.38
TRAF4-207ENST00000461195 ZNF2Q9BSG1 426 aaPredicted RBP17.43■□□□□ 0.38
TRAF4-207ENST00000461195 ALX4Q9H161 411 aaPredicted RBP17.43■□□□□ 0.38
TRAF4-207ENST00000461195 ZNF430Q9H8G1 570 aaPredicted RBP17.43■□□□□ 0.38
TRAF4-207ENST00000461195 TNCP24821 2201 aa17.43■□□□□ 0.38
TRAF4-207ENST00000461195 MSGN1A6NI15 193 aa17.42■□□□□ 0.38
TRAF4-207ENST00000461195 CATR1Q13166 79 aa17.42■□□□□ 0.38
TRAF4-207ENST00000461195 ZNF818PQ6ZRF7 136 aa17.42■□□□□ 0.38
TRAF4-207ENST00000461195 CLVS1Q8IUQ0 354 aaPredicted RBP17.42■□□□□ 0.38
TRAF4-207ENST00000461195 LYSMD2Q8IV50 215 aa17.42■□□□□ 0.38
TRAF4-207ENST00000461195 VKORC1L1Q8N0U8 176 aa17.42■□□□□ 0.38
TRAF4-207ENST00000461195 SRSF12Q8WXF0 261 aaKnown RBP17.42■□□□□ 0.38
TRAF4-207ENST00000461195 ADAM30Q9UKF2 790 aa17.42■□□□□ 0.38
TRAF4-207ENST00000461195 SULT1C2O00338 296 aa17.41■□□□□ 0.38
TRAF4-207ENST00000461195 OR2A4O95047 310 aa17.41■□□□□ 0.38
TRAF4-207ENST00000461195 HRASP01112 189 aa17.41■□□□□ 0.38
TRAF4-207ENST00000461195 IGHV3-11P01762 117 aa17.41■□□□□ 0.38
TRAF4-207ENST00000461195 HLA-DMAP28067 261 aa17.41■□□□□ 0.38
TRAF4-207ENST00000461195 HRH1P35367 487 aa17.41■□□□□ 0.38
TRAF4-207ENST00000461195 SPAG16Q8N0X2 631 aa17.41■□□□□ 0.38
TRAF4-207ENST00000461195 MOB3AQ96BX8 217 aa17.41■□□□□ 0.38
TRAF4-207ENST00000461195 RHOVQ96L33 236 aa17.41■□□□□ 0.38
TRAF4-207ENST00000461195 OR2A7Q96R45 310 aa17.41■□□□□ 0.38
TRAF4-207ENST00000461195 LINC01619G3V211 115 aa17.4■□□□□ 0.38
TRAF4-207ENST00000461195 RBFOX2O43251 390 aaKnown RBP eCLIP17.4■□□□□ 0.381e-6■□□□□ 9.7
TRAF4-207ENST00000461195 KBTBD11O94819 623 aa17.4■□□□□ 0.38
TRAF4-207ENST00000461195 BRI3O95415 125 aa17.4■□□□□ 0.38
TRAF4-207ENST00000461195 GNRHRP30968 328 aa17.4■□□□□ 0.38
TRAF4-207ENST00000461195 RCVRNP35243 200 aa17.4■□□□□ 0.38
TRAF4-207ENST00000461195 C9orf66Q5T8R8 295 aa17.4■□□□□ 0.38
TRAF4-207ENST00000461195 PUSL1Q8N0Z8 303 aaKnown RBP17.4■□□□□ 0.38
TRAF4-207ENST00000461195 OR6F1Q8NGZ6 308 aa17.4■□□□□ 0.38
TRAF4-207ENST00000461195 RAB2BQ8WUD1 216 aa17.4■□□□□ 0.38
TRAF4-207ENST00000461195 AIFM2Q9BRQ8 373 aa17.4■□□□□ 0.38
TRAF4-207ENST00000461195 ZMAT5Q9UDW3 170 aaKnown RBP17.4■□□□□ 0.38
TRAF4-207ENST00000461195 A0A0G2JLM5 398 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 C13orf42A0A1B0GVH6 325 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 SEC14L6B5MCN3 397 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 MPPED1O15442 326 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 RAMP3O60896 148 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 APELAP0DMC3 54 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 SPCS2Q15005 226 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 TMEM167AQ8TBQ9 72 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 SPIN2AQ99865 258 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 SPIN2BQ9BPZ2 258 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 COA4Q9NYJ1 87 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 EXTL2Q9UBQ6 330 aa17.39■□□□□ 0.37
TRAF4-207ENST00000461195 IGHV4OR15-8A0A075B7B6 117 aa17.38■□□□□ 0.37
TRAF4-207ENST00000461195 A0A087WW49 117 aa17.38■□□□□ 0.37
TRAF4-207ENST00000461195 HSPB1P04792 205 aaKnown RBP17.38■□□□□ 0.37
TRAF4-207ENST00000461195 OR9G9P0C7N8 305 aa17.38■□□□□ 0.37
TRAF4-207ENST00000461195 RPL5P46777 297 aaKnown RBP17.38■□□□□ 0.37
TRAF4-207ENST00000461195 TMBIM6P55061 237 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms