RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 BPIFB6Q8NFQ5 453 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 MUC7Q8TAX7 377 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 TWIST2Q8WVJ9 160 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 TMEM239Q8WW34 195 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 APOBEC3DQ96AK3 386 aaPredicted RBP1.5□□□□□ -2.17
RFC4-211ENST00000460408 TRIB3Q96RU7 358 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 PITX2Q99697 317 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 B9D2Q9BPU9 175 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 GABARAPL1Q9H0R8 117 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 OR2D2Q9H210 308 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 GOLPH3Q9H4A6 298 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 RHOFQ9HBH0 211 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 STK38LQ9Y2H1 464 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 CITO14578 2027 aa1.5□□□□□ -2.17
RFC4-211ENST00000460408 MYH10P35580 1976 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 DENND4CQ5VZ89 1909 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 IGKV1D-37A0A075B6S9 117 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 IGHV1-45A0A0A0MS14 117 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 IGHV2-26A0A0B4J1V2 119 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 SPTY2D1-AS1A0A0U1RR47 76 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 A0A1B0GU33 70 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 TMEM250H0YL14 139 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 SLC31A1O15431 190 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 PDYNP01213 254 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 UQCRHP07919 91 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 MLNP12872 115 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 GABRA1P14867 456 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 CTLA4P16410 223 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 F8A1P23610 371 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 CD151P48509 253 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 PSMD8P48556 350 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 HADHBP55084 474 aaKnown RBP1.49□□□□□ -2.17
RFC4-211ENST00000460408 HBG1P69891 147 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 HBG2P69892 147 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 PRDX1Q06830 199 aaKnown RBP1.49□□□□□ -2.17
RFC4-211ENST00000460408 TRIP13Q15645 432 aaPredicted RBP1.49□□□□□ -2.17
RFC4-211ENST00000460408 GOLGA7BQ2TAP0 167 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 LAMTOR1Q6IAA8 161 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 LAIR2Q6ISS4 152 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 CLEC20AQ6ZU45 233 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 AHSA2Q719I0 299 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 EIF4E3Q8N5X7 224 aaKnown RBP1.49□□□□□ -2.17
RFC4-211ENST00000460408 CMTM2Q8TAZ6 248 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 CCL19Q99731 98 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 SPZ1Q9BXG8 430 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 ULBP1Q9BZM6 244 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 METTL8Q9H825 291 aaKnown RBP1.49□□□□□ -2.17
RFC4-211ENST00000460408 IFT46Q9NQC8 304 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 FADS3Q9Y5Q0 445 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 U3KQK5 164 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 DNAH1Q9P2D7 4330 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 MDC1Q14676 2089 aaKnown RBP1.49□□□□□ -2.17
RFC4-211ENST00000460408 MYOFQ9NZM1 2061 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 COL7A1Q02388 2944 aa1.49□□□□□ -2.17
RFC4-211ENST00000460408 DYNC2H1Q8NCM8 4307 aaKnown RBP1.49□□□□□ -2.17
RFC4-211ENST00000460408 NCOA6Q14686 2063 aaPredicted RBP1.48□□□□□ -2.17
RFC4-211ENST00000460408 TRAV17A0A0B4J275 112 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 LCE6AA0A183 80 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 ZNF879B4DU55 563 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 UBDO15205 165 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 POP7O75817 140 aaKnown RBP1.48□□□□□ -2.17
RFC4-211ENST00000460408 RPA3P35244 121 aaPredicted RBP1.48□□□□□ -2.17
RFC4-211ENST00000460408 SRP14P37108 136 aaKnown RBP1.48□□□□□ -2.17
RFC4-211ENST00000460408 OR10A3P58181 314 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 UBE2KP61086 200 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 ZBTB6Q15916 424 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 BSXQ3C1V8 233 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 LGALSLQ3ZCW2 172 aaPredicted RBP1.48□□□□□ -2.17
RFC4-211ENST00000460408 C6orf52Q5T4I8 152 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 FAM162BQ5T6X4 162 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 SDHAF4Q5VUM1 108 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 NXNL2Q5VZ03 156 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 ELP2Q6IA86 826 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 FAM183BPQ6ZVS7 135 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 GATD1Q8NB37 220 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 ZNF738Q8NE65 137 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 DDI1Q8WTU0 396 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 CT55Q8WUE5 264 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 ITFG2Q969R8 447 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 SLC25A44Q96H78 314 aaPredicted RBP1.48□□□□□ -2.17
RFC4-211ENST00000460408 TSSK6Q9BXA6 273 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 XPNPEP1Q9NQW7 623 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 OR5V1Q9UGF6 321 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 SNX24Q9Y343 169 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 FREM1Q5H8C1 2179 aa1.48□□□□□ -2.17
RFC4-211ENST00000460408 ZNF407Q9C0G0 2248 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 RYR2Q92736 4967 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 A0A1B0GX12 115 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 A0A1W2PNM2 257 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 ERICH2A1L162 156 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 OR5H14A6NHG9 310 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 FAM183AA6NL82 134 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 C9J4A7 227 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 C8orf87E5RJ46 101 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 SYNGR2O43760 224 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 BRI3O95415 125 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 SOX14O95416 240 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 FADS2O95864 444 aaKnown RBP1.47□□□□□ -2.17
RFC4-211ENST00000460408 EPPINO95925 133 aa1.47□□□□□ -2.17
RFC4-211ENST00000460408 KCNE1P15382 129 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms