RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 NHLH2Q02577 135 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 VWC2Q2TAL6 325 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 LRRC75BQ2VPJ9 315 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 SPSB3Q6PJ21 355 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 SCCPDHQ8NBX0 429 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 PPP1R35Q8TAP8 253 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 HSD17B10Q99714 261 aaKnown RBP3.93□□□□□ -1.78
EDEM3-203ENST00000439962 TXNDC17Q9BRA2 123 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 AGMATQ9BSE5 352 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 ADAT1Q9BUB4 502 aaKnown RBP3.93□□□□□ -1.78
EDEM3-203ENST00000439962 METTL1Q9UBP6 276 aaKnown RBP3.93□□□□□ -1.78
EDEM3-203ENST00000439962 HSPB7Q9UBY9 170 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 C7orf77A4D0Y5 90 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 SSSCA1O60232 199 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 OR2H2O95918 312 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 SRP14P37108 136 aaKnown RBP3.93□□□□□ -1.78
EDEM3-203ENST00000439962 DYNLT3P51808 116 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 ATP5IP56385 69 aaPredicted RBP3.93□□□□□ -1.78
EDEM3-203ENST00000439962 CD81P60033 236 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF616Q08AN1 781 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 SMIM21Q3B7S5 101 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 SOHLH1Q5JUK2 328 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 FOXRED2Q8IWF2 684 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 IQCF2Q8IXL9 164 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 FGFRL1Q8N441 504 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.93□□□□□ -1.78
EDEM3-203ENST00000439962 NUP37Q8NFH4 326 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 OR5C1Q8NGR4 320 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 OR52E5Q8NH55 327 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 SCGB1C1Q8TD33 95 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 RXFP4Q8TDU9 374 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 C10orf105Q8TEF2 133 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 EDARADDQ8WWZ3 215 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 IGFBPL1Q8WX77 278 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 DYRK2Q92630 601 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 GALMQ96C23 342 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 GPR146Q96CH1 333 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 BTF3L4Q96K17 158 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 YPEL4Q96NS1 127 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 GGACTQ9BVM4 153 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 CTDSP1Q9GZU7 261 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 EIF5A2Q9GZV4 153 aaKnown RBP3.93□□□□□ -1.78
EDEM3-203ENST00000439962 HIF1ANQ9NWT6 349 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 PKD1L1Q8TDX9 2849 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 NOTCH1P46531 2555 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 LOC102723971A0A1B0GUV8 181 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 FAM24AA6NFZ4 105 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 KCNAB3O43448 404 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 CHST1O43916 411 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 MPDU1O75352 247 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 IFNA17P01571 189 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 IGLV2-14P01704 120 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 SRP19P09132 144 aaKnown RBP3.92□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF44P15621 663 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 POLR2GP62487 172 aaKnown RBP eCLIP3.92□□□□□ -1.78
EDEM3-203ENST00000439962 RPP30P78346 268 aaKnown RBP3.92□□□□□ -1.78
EDEM3-203ENST00000439962 AWAT1Q58HT5 328 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM41BQ5BJD5 291 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM14EPQ6UXP3 125 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 ODF3L1Q8IXM7 274 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 CLDND2Q8NHS1 167 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 FAM213BQ8TBF2 198 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 HIST1H2BAQ96A08 127 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 MBD6Q96DN6 1003 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 TVP23CQ96ET8 276 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF251Q9BRH9 671 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF581Q9P0T4 197 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 TRAPPC2LQ9UL33 140 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 SOX21Q9Y651 276 aaPredicted RBP3.92□□□□□ -1.78
EDEM3-203ENST00000439962 LOC105371242A0A075B767 164 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 C5orf52A6NGY3 159 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 FNDC10F2Z333 226 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 CDIPTO14735 213 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 HSD17B6O14756 317 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 NXPH2O95156 264 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 HAND1O96004 215 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 CRYBA1P05813 215 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF154Q13106 437 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 DUX4L9Q6RFH8 374 aaPredicted RBP3.92□□□□□ -1.78
EDEM3-203ENST00000439962 RBMS3Q6XE24 437 aaKnown RBP3.92□□□□□ -1.78
EDEM3-203ENST00000439962 ACP7Q6ZNF0 438 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM182Q6ZP80 229 aaPredicted RBP3.92□□□□□ -1.78
EDEM3-203ENST00000439962 CBLN2Q8IUK8 224 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 OR51H1Q8NH63 302 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF488Q96MN9 340 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 DIRC2Q96SL1 478 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 SMIM3Q9BZL3 60 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 MANBALQ9NQG1 85 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 KCNIP2Q9NS61 270 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.92□□□□□ -1.78
EDEM3-203ENST00000439962 PSENENQ9NZ42 101 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 JPT1Q9UK76 154 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM250H0YL14 139 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 HMGB3O15347 200 aaKnown RBP3.92□□□□□ -1.78
EDEM3-203ENST00000439962 MLNRO43193 412 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 SELLP14151 372 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 RAB5AP20339 215 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 GZMHP20718 246 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 RND2P52198 227 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 GNB2P62879 340 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms