RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 HIST1H2BMQ99879 126 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 GABRG3Q99928 467 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 AGMATQ9BSE5 352 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ZNF2Q9BSG1 426 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 NICN1Q9BSH3 213 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 PSMG3Q9BT73 122 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 DCTN5Q9BTE1 182 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 C20orf24Q9BUV8 137 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ST6GALNAC5Q9BVH7 336 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 PECRQ9BY49 303 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 PARD6GQ9BYG4 376 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 TCEAL2Q9H3H9 227 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 PTGES2Q9H7Z7 377 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ZNF286AQ9HBT8 521 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 CENPMQ9NSP4 180 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 LYRM2Q9NU23 88 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 PLEKHJ1Q9NW61 149 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HRASLS2Q9NWW9 162 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 IL36GQ9NZH8 169 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 COPS7AQ9UBW8 275 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 AK3Q9UIJ7 227 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 VAX2Q9UIW0 290 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ANXA10Q9UJ72 324 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ZNF391Q9UJN7 358 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 POLR1DQ9Y2S0 133 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 MRPS2Q9Y399 296 aaKnown RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 FBXO7Q9Y3I1 522 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 CHTOPQ9Y3Y2 248 aaKnown RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 WSB1Q9Y6I7 421 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 CHD9Q3L8U1 2897 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ADAMTS9Q9P2N4 1935 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 FREM3P0C091 2139 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ATG2AQ2TAZ0 1938 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 EXPH5Q8NEV8 1989 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 IGKV3D-11A0A0A0MRZ8 115 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 A0A0A6YYD4 124 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 TEX48A0A1B0GUV7 120 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 LOC102725191A0A1B0GVB3 256 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 RPL37AP8A6NKH3 93 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 VSTM2BA6NLU5 285 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 ZNF850A8MQ14 1090 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SRRM5B3KS81 715 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 TRDCB7Z8K6 153 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 C5orf67F2Z3F1 127 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 TMEM250H0YL14 139 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 H3BSH0 61 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 K7EQS6 105 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 M0R143 59 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SDCBPO00560 298 aaPredicted RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 SLC31A1O15431 190 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 DHRS3O75911 302 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 VENTXO95231 258 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 DIRAS3O95661 229 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 IFNA5P01569 189 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 IGLV3-1P01715 115 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 TRGC2P03986 189 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SOD3P08294 240 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 CXCL1P09341 107 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 WNT2P09544 360 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 CTXN2P0C2S0 81 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 LINC00614P0C842 121 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 TRGC1P0CF51 173 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 BCL2P10415 239 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SPTBP11277 2137 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 CD99P14209 185 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 PVRP15151 417 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 ZNF43P17038 809 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 BCKDHBP21953 392 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 ATP6V0CP27449 155 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 PPP1CCP36873 323 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 SRP14P37108 136 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 CD200P41217 278 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 CAPZBP47756 277 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 OR1D4P47884 311 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 GABRA4P48169 554 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 ZNF121P58317 390 aaPredicted RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 RPL23AP62750 156 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 LCN2P80188 198 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SERF2P84101 59 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 HTD2P86397 168 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 TGIF1Q15583 401 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 USF2Q15853 346 aaPredicted RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 NNATQ16517 81 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 HIST3H3Q16695 136 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 FAM78AQ5JUQ0 283 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 DCAF12Q5T6F0 453 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 LEMD1Q68G75 181 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SPINK14Q6IE38 97 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 ZNF774Q6NX45 483 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 KCNIP4Q6PIL6 250 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 REG3GQ6UW15 175 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 BTNL3Q6UXE8 466 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SPNS3Q6ZMD2 512 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 Q6ZS49 121 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 MARCH3Q86UD3 253 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 ZNF695Q8IW36 515 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 ZNF100Q8IYN0 542 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 CMTM1Q8IZ96 169 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 CYB561D1Q8N8Q1 229 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms