RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 DFFBO76075 338 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 NXPH2O95156 264 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 HAND1O96004 215 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 IGLV1-44P01699 117 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 SFTA3P0C7M3 94 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 ATP6V0CP27449 155 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 CD80P33681 288 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 EIF2S3P41091 472 aaKnown RBP3.95□□□□□ -1.78
USP48-202ENST00000374730 NPBWR1P48145 328 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 ARHGDIBP52566 201 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 ADORA2A-AS1P86434 159 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 PAX5Q02548 391 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 PSG7Q13046 419 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 PEA15Q15121 130 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 GUK1Q16774 197 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 ACSF3Q4G176 576 aaPredicted RBP3.95□□□□□ -1.78
USP48-202ENST00000374730 GFI1BQ5VTD9 330 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 SLC35E4Q6ICL7 350 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 DPPA3Q6W0C5 159 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 C5orf24Q7Z6I8 188 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 VASH2Q86V25 355 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 ODF3L1Q8IXM7 274 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 WDR31Q8NA23 367 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 DEFB124Q8NES8 71 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 OR1J1Q8NGS3 322 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 KLF14Q8TD94 323 aaPredicted RBP3.95□□□□□ -1.78
USP48-202ENST00000374730 GNPNAT1Q96EK6 184 aaPredicted RBP3.95□□□□□ -1.78
USP48-202ENST00000374730 RAB40CQ96S21 281 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 BCL2L14Q9BZR8 327 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 CXXC4Q9H2H0 198 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 TMEM231Q9H6L2 316 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 SEBOXQ9HB31 216 aaPredicted RBP3.95□□□□□ -1.78
USP48-202ENST00000374730 TAAR3PQ9P1P4 343 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 OR1A1Q9P1Q5 309 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 FAM96BQ9Y3D0 163 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 WSB1Q9Y6I7 421 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 URB1O60287 2271 aaKnown RBP3.95□□□□□ -1.78
USP48-202ENST00000374730 DSCAML1Q8TD84 2053 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 TANC2Q9HCD6 1990 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 LOC400499M0QZD8 3231 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 A0A0G2JRQ6 117 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 SPAARA0A1B0GVQ0 90 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 A0A1W2PR80 420 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 C9JQL5 133 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 ATP6V1G2-DDX39BF2Z307 99 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 H7C2Y5 167 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 IFNL4K9M1U5 179 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 CDIPTO14735 213 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 TNFSF12O43508 249 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 WDR1O75083 606 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 LYZL6O75951 148 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 PTBP3O95758 552 aaKnown RBP3.94□□□□□ -1.78
USP48-202ENST00000374730 TMEM50AO95807 157 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 IGKV1-39P01597 117 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 PRH1P02810 166 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 IGKV1D-39P04432 117 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 SERPINE2P07093 398 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 CECR9P0C854 216 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 PSG2P11465 335 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 MPV17P39210 176 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 SULT1A1P50225 295 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 NOVA1P51513 510 aaKnown RBP3.94□□□□□ -1.78
USP48-202ENST00000374730 CCL11P51671 97 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 DYNLT3P51808 116 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 PAX9P55771 341 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 TAS2R30P59541 319 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 ERVS71-1P61550 626 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 RPL23AP62750 156 aaKnown RBP3.94□□□□□ -1.78
USP48-202ENST00000374730 HTD2P86397 168 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 MZT1Q08AG7 82 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 ZNF616Q08AN1 781 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 SRSF6Q13247 344 aaKnown RBP3.94□□□□□ -1.78
USP48-202ENST00000374730 P2RY6Q15077 328 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 EIF2S3LQ2VIR3 472 aaKnown RBP3.94□□□□□ -1.78
USP48-202ENST00000374730 ALKBH6Q3KRA9 238 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
USP48-202ENST00000374730 ACP7Q6ZNF0 438 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 TMEM182Q6ZP80 229 aaPredicted RBP3.94□□□□□ -1.78
USP48-202ENST00000374730 STX12Q86Y82 276 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 C11orf53Q8IXP5 236 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 GCNT2Q8N0V5 402 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 TCTEX1D1Q8N7M0 179 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 CNEP1R1Q8N9A8 125 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 HSD17B11Q8NBQ5 300 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 OR5C1Q8NGR4 320 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 OR10Z1Q8NGY1 313 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 GPR146Q96CH1 333 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 ATP5SQ99766 215 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 PBDC1Q9BVG4 233 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 SH3BGRL3Q9H299 93 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 COA4Q9NYJ1 87 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 MDFICQ9P1T7 246 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 ERRFI1Q9UJM3 462 aaPredicted RBP3.94□□□□□ -1.78
USP48-202ENST00000374730 TRAPPC2LQ9UL33 140 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 PRELID3BQ9Y3B1 194 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 MAST4O15021 2626 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 BSNQ9UPA5 3926 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 HCFC1P51610 2035 aa3.94□□□□□ -1.78
USP48-202ENST00000374730 FASNP49327 2511 aaKnown RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 PRR14LQ5THK1 2151 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms