RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PRSS3P35030 304 aa17.78■□□□□ 0.44
LSM4-201ENST00000252816 FXYD4P59646 89 aa17.78■□□□□ 0.44
LSM4-201ENST00000252816 ZNF66Q6ZN08 573 aa17.78■□□□□ 0.44
LSM4-201ENST00000252816 MRAPQ8TCY5 172 aa17.78■□□□□ 0.44
LSM4-201ENST00000252816 SLC5A7Q9GZV3 580 aa17.78■□□□□ 0.44
LSM4-201ENST00000252816 MRPS7Q9Y2R9 242 aaKnown RBP17.78■□□□□ 0.44
LSM4-201ENST00000252816 RFX2P48378 723 aa17.77■□□□□ 0.44
LSM4-201ENST00000252816 TPPP2P59282 170 aa17.77■□□□□ 0.44
LSM4-201ENST00000252816 ZNF616Q08AN1 781 aa17.77■□□□□ 0.44
LSM4-201ENST00000252816 MSMO1Q15800 293 aa17.77■□□□□ 0.44
LSM4-201ENST00000252816 VKORC1L1Q8N0U8 176 aa17.77■□□□□ 0.44
LSM4-201ENST00000252816 OR4S2Q8NH73 311 aa17.77■□□□□ 0.44
LSM4-201ENST00000252816 ZNF430Q9H8G1 570 aaPredicted RBP17.77■□□□□ 0.44
LSM4-201ENST00000252816 EHFQ9NZC4 300 aa17.77■□□□□ 0.44
LSM4-201ENST00000252816 IGHV3-11P01762 117 aa17.76■□□□□ 0.43
LSM4-201ENST00000252816 PMP2P02689 132 aa17.76■□□□□ 0.43
LSM4-201ENST00000252816 LGALS1P09382 135 aaKnown RBP17.76■□□□□ 0.43
LSM4-201ENST00000252816 OR8U8P0C7N1 319 aa17.76■□□□□ 0.43
LSM4-201ENST00000252816 APELAP0DMC3 54 aa17.76■□□□□ 0.43
LSM4-201ENST00000252816 TNXAQ16473 311 aa17.76■□□□□ 0.43
LSM4-201ENST00000252816 GPR141Q7Z602 305 aa17.76■□□□□ 0.43
LSM4-201ENST00000252816 POC5Q8NA72 575 aa17.76■□□□□ 0.43
LSM4-201ENST00000252816 GPX8Q8TED1 209 aa17.76■□□□□ 0.43
LSM4-201ENST00000252816 SLA2Q9H6Q3 261 aa17.76■□□□□ 0.43
LSM4-201ENST00000252816 SMIM31A0A1B0GVY4 71 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 WI2-2373I1.2A0A1W2PRP0 233 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 MSGN1A6NI15 193 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 K7EIL1 84 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 TRGV3P03979 118 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 CD40LGP29965 261 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 DYRK1AQ13627 763 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 DHRS11Q6UWP2 260 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 ZNF818PQ6ZRF7 136 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 TMEM17Q86X19 198 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 SNX29P2Q8IUI4 249 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 LYSMD2Q8IV50 215 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 ZBTB34Q8NCN2 500 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 SRSF12Q8WXF0 261 aaKnown RBP17.75■□□□□ 0.43
LSM4-201ENST00000252816 DPF1Q92782 380 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 RHOVQ96L33 236 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 ZNF355PQ9NSJ1 428 aa17.75■□□□□ 0.43
LSM4-201ENST00000252816 RAMP3O60896 148 aa17.74■□□□□ 0.43
LSM4-201ENST00000252816 ZNF182P17025 639 aaPredicted RBP17.74■□□□□ 0.43
LSM4-201ENST00000252816 TAS2R46P59540 309 aa17.74■□□□□ 0.43
LSM4-201ENST00000252816 C10orf55Q5SWW7 151 aa17.74■□□□□ 0.43
LSM4-201ENST00000252816 TMEM68Q96MH6 324 aa17.74■□□□□ 0.43
LSM4-201ENST00000252816 IGHV4OR15-8A0A075B7B6 117 aa17.73■□□□□ 0.43
LSM4-201ENST00000252816 A0A087WW49 117 aa17.73■□□□□ 0.43
LSM4-201ENST00000252816 SEC14L6B5MCN3 397 aa17.73■□□□□ 0.43
LSM4-201ENST00000252816 H3BUA1 57 aa17.73■□□□□ 0.43
LSM4-201ENST00000252816 HLA-DMAP28067 261 aa17.73■□□□□ 0.43
LSM4-201ENST00000252816 HERV-K104P61576 105 aa17.73■□□□□ 0.43
LSM4-201ENST00000252816 MZT2AQ6P582 158 aa17.73■□□□□ 0.43
LSM4-201ENST00000252816 OR5H2Q8NGV7 314 aa17.73■□□□□ 0.43
LSM4-201ENST00000252816 DCUN1D4Q92564 292 aa17.73■□□□□ 0.43
LSM4-201ENST00000252816 PHB2Q99623 299 aa17.73■□□□□ 0.43
LSM4-201ENST00000252816 ZNF2Q9BSG1 426 aaPredicted RBP17.73■□□□□ 0.43
LSM4-201ENST00000252816 SULT1C2O00338 296 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 GNRHRP30968 328 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 HRH1P35367 487 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 KIR2DS2P43631 304 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 SLURP1P55000 103 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 C9orf66Q5T8R8 295 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 MMD2Q8IY49 270 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 SPAG16Q8N0X2 631 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 PUSL1Q8N0Z8 303 aaKnown RBP17.72■□□□□ 0.43
LSM4-201ENST00000252816 AP3S1Q92572 193 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 MOB3AQ96BX8 217 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 SCPEP1Q9HB40 452 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 SCOCQ9UIL1 159 aa17.72■□□□□ 0.43
LSM4-201ENST00000252816 FAM25AB3EWG3 89 aa17.71■□□□□ 0.43
LSM4-201ENST00000252816 FAM25CB3EWG5 89 aa17.71■□□□□ 0.43
LSM4-201ENST00000252816 FAM25GB3EWG6 89 aa17.71■□□□□ 0.43
LSM4-201ENST00000252816 LINC01619G3V211 115 aa17.71■□□□□ 0.43
LSM4-201ENST00000252816 CREBL2O60519 120 aaPredicted RBP17.71■□□□□ 0.43
LSM4-201ENST00000252816 OR2A4O95047 310 aa17.71■□□□□ 0.43
LSM4-201ENST00000252816 DEFA5Q01523 94 aa17.71■□□□□ 0.43
LSM4-201ENST00000252816 SPCS2Q15005 226 aa17.71■□□□□ 0.43
LSM4-201ENST00000252816 ADAD2Q8NCV1 583 aaKnown RBP17.71■□□□□ 0.43
LSM4-201ENST00000252816 DLX4Q92988 240 aaPredicted RBP17.71■□□□□ 0.43
LSM4-201ENST00000252816 OR2A7Q96R45 310 aa17.71■□□□□ 0.43
LSM4-201ENST00000252816 TINAGL1Q9GZM7 467 aaPredicted RBP17.71■□□□□ 0.43
LSM4-201ENST00000252816 RBMXL2O75526 392 aaKnown RBP17.7■□□□□ 0.42
LSM4-201ENST00000252816 ACTL6BO94805 426 aa17.7■□□□□ 0.42
LSM4-201ENST00000252816 KBTBD11O94819 623 aa17.7■□□□□ 0.42
LSM4-201ENST00000252816 BRI3O95415 125 aa17.7■□□□□ 0.42
LSM4-201ENST00000252816 HSPB1P04792 205 aaKnown RBP17.7■□□□□ 0.42
LSM4-201ENST00000252816 SSX9Q7RTT3 188 aa17.7■□□□□ 0.42
LSM4-201ENST00000252816 CLVS1Q8IUQ0 354 aaPredicted RBP17.7■□□□□ 0.42
LSM4-201ENST00000252816 OR51H1Q8NH63 302 aa17.7■□□□□ 0.42
LSM4-201ENST00000252816 VSTM2AQ8TAG5 236 aa17.7■□□□□ 0.42
LSM4-201ENST00000252816 TMEM167AQ8TBQ9 72 aa17.7■□□□□ 0.42
LSM4-201ENST00000252816 FXYD6Q9H0Q3 95 aa17.7■□□□□ 0.42
LSM4-201ENST00000252816 COA4Q9NYJ1 87 aa17.7■□□□□ 0.42
LSM4-201ENST00000252816 ADAM30Q9UKF2 790 aa17.7■□□□□ 0.42
LSM4-201ENST00000252816 RBFOX2O43251 390 aaKnown RBP eCLIP17.69■□□□□ 0.42
LSM4-201ENST00000252816 HRASP01112 189 aa17.69■□□□□ 0.42
LSM4-201ENST00000252816 OR9G9P0C7N8 305 aa17.69■□□□□ 0.42
LSM4-201ENST00000252816 CATR1Q13166 79 aa17.69■□□□□ 0.42
LSM4-201ENST00000252816 C13orf42A0A1B0GVH6 325 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms