RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 MARCH11A6NNE9 402 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 J3QR06 171 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 SCGB1D2O95969 90 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 APOA2P02652 100 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 HKR1P10072 659 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 RAB13P51153 203 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 ZNF134P52741 427 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 DSCR9P59020 149 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 RPL30P62888 115 aaKnown RBP10.78□□□□□ -0.68
SLIRP-201ENST00000238688 EXOSC2Q13868 293 aaKnown RBP10.78□□□□□ -0.68
SLIRP-201ENST00000238688 ZNF266Q14584 549 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 TMEM249Q2WGJ8 235 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 PRAMEF5Q5TYX0 476 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 CLEC2AQ6UVW9 174 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 ODF3L1Q8IXM7 274 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 LYG1Q8N1E2 194 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 STPG2Q8N412 459 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 OR2C3Q8N628 320 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 UBAC2Q8NBM4 344 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 OSR1Q8TAX0 266 aaPredicted RBP10.78□□□□□ -0.68
SLIRP-201ENST00000238688 ST8SIA2Q92186 375 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 SMIM8Q96KF7 97 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 ZNF251Q9BRH9 671 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 ZNF471Q9BX82 626 aaPredicted RBP10.78□□□□□ -0.68
SLIRP-201ENST00000238688 SLC25A32Q9H2D1 315 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 TMEM133Q9H2Q1 129 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 UNKLQ9H9P5 680 aaKnown RBP10.78□□□□□ -0.68
SLIRP-201ENST00000238688 ZC4H2Q9NQZ6 224 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 YAE1D1Q9NRH1 226 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 MED9Q9NWA0 146 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 HSPB7Q9UBY9 170 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 CACNG5Q9UF02 275 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 PPIAL4CA0A0B4J2A2 164 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 LINC00473A8K010 186 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 A8MXK9 166 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 SYNGR2O43760 224 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 PPIAL4GP0DN37 164 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 SLC25A16P16260 332 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 OMGP23515 440 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 MC5RP33032 325 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 GNB2P62879 340 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 LTC4SQ16873 150 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 ZNF429Q86V71 674 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 STX12Q86Y82 276 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 BAP18Q8IXM2 172 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 DMBX1Q8NFW5 382 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 OR10X1Q8NGY0 326 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 FAM168AQ92567 244 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 R3HDM4Q96D70 268 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 SSBP3Q9BWW4 388 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-201ENST00000238688 MXRA5Q9NR99 2828 aa10.77□□□□□ -0.69
SLIRP-201ENST00000238688 RAMP3O60896 148 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 PROP1O75360 226 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 FCN3O75636 299 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 DFFBO76075 338 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 S1PR2O95136 353 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 S100A1P23297 94 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 PDLIM4P50479 330 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 ATP5IP56385 69 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-201ENST00000238688 BRWD1-AS2P59051 145 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 TNFRSF9Q07011 255 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 NCR3LG1Q68D85 454 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 PDPNQ86YL7 162 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 PUSL1Q8N0Z8 303 aaKnown RBP10.76□□□□□ -0.69
SLIRP-201ENST00000238688 OR5AN1Q8NGI8 311 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 OR13D1Q8NGV5 346 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 VSTM2AQ8TAG5 236 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 CLEC7AQ9BXN2 247 aa10.76□□□□□ -0.69
SLIRP-201ENST00000238688 LINC00862A6NCI5 91 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 ENSAO43768 121 aaKnown RBP10.75□□□□□ -0.69
SLIRP-201ENST00000238688 FCGR3BO75015 233 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 KRASP01116 189 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 IGHV4-31P0DP07 118 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 CCL3L1P16619 93 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 HTR2BP41595 481 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 HBG1P69891 147 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 HBG2P69892 147 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 RPP30P78346 268 aaKnown RBP10.75□□□□□ -0.69
SLIRP-201ENST00000238688 BTNL3Q6UXE8 466 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 OR4A5Q8NH83 315 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 ST6GALNAC6Q969X2 333 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 CLCC1Q96S66 551 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 GPHA2Q96T91 129 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 FKBP11Q9NYL4 201 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 POLR3KQ9Y2Y1 108 aaPredicted RBP10.75□□□□□ -0.69
SLIRP-201ENST00000238688 KPTNQ9Y664 436 aa10.75□□□□□ -0.69
SLIRP-201ENST00000238688 LOC105371242A0A075B767 164 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 MSGN1A6NI15 193 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 LYNX1G3V0Z9 82 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 SLC31A2O15432 143 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 SSSCA1O60232 199 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 IGLV1-47P01700 117 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 LYNX1P0DP58 116 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 EPHA1P21709 976 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 USF1P22415 310 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-201ENST00000238688 SULT1A1P50225 295 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 SPCS3P61009 180 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 UBE2KP61086 200 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 POLR2GP62487 172 aaKnown RBP eCLIP10.74□□□□□ -0.69
SLIRP-201ENST00000238688 ZNF816Q0VGE8 651 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms