RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MAP3K15Q6ZN16 1313 aa18.95■□□□□ 0.62
SCN3B-202ENST00000392770 POLD1P28340 1107 aa18.95■□□□□ 0.62
SCN3B-202ENST00000392770 AOPEPQ8N6M6 819 aa18.95■□□□□ 0.62
SCN3B-202ENST00000392770 ERMNQ8TAM6 284 aa18.95■□□□□ 0.62
SCN3B-202ENST00000392770 TRIM47Q96LD4 638 aa18.95■□□□□ 0.62
SCN3B-202ENST00000392770 LIG1P18858 919 aa18.95■□□□□ 0.62
SCN3B-202ENST00000392770 ASAP1Q9ULH1 1129 aa18.95■□□□□ 0.62
SCN3B-202ENST00000392770 PCCAP05165 728 aaPredicted RBP18.95■□□□□ 0.62
SCN3B-202ENST00000392770 PARP1P09874 1014 aaKnown RBP18.95■□□□□ 0.62
SCN3B-202ENST00000392770 KIF18AQ8NI77 898 aa18.95■□□□□ 0.62
SCN3B-202ENST00000392770 SMARCC2Q8TAQ2 1214 aa18.95■□□□□ 0.62
SCN3B-202ENST00000392770 STK32BQ9NY57 414 aa18.94■□□□□ 0.62
SCN3B-202ENST00000392770 LRRC24Q50LG9 513 aa18.94■□□□□ 0.62
SCN3B-202ENST00000392770 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
SCN3B-202ENST00000392770 XRCC6P12956 609 aaKnown RBP eCLIP18.94■□□□□ 0.62
SCN3B-202ENST00000392770 TNNT1P13805 278 aa18.94■□□□□ 0.62
SCN3B-202ENST00000392770 LLPHQ9BRT6 129 aaKnown RBP18.94■□□□□ 0.62
SCN3B-202ENST00000392770 TYRO3Q06418 890 aa18.94■□□□□ 0.62
SCN3B-202ENST00000392770 AXDND1Q5T1B0 1012 aaPredicted RBP18.94■□□□□ 0.62
SCN3B-202ENST00000392770 CCDC150Q8NCX0 1101 aa18.94■□□□□ 0.62
SCN3B-202ENST00000392770 C16orf45Q96MC5 204 aaPredicted RBP18.94■□□□□ 0.62
SCN3B-202ENST00000392770 RBM26Q5T8P6 1007 aaKnown RBP18.94■□□□□ 0.62
SCN3B-202ENST00000392770 TTC6Q86TZ1 520 aa18.94■□□□□ 0.62
SCN3B-202ENST00000392770 DSCC1Q9BVC3 393 aa18.94■□□□□ 0.62
SCN3B-202ENST00000392770 ANGEL1Q9UNK9 670 aaKnown RBP18.94■□□□□ 0.62
SCN3B-202ENST00000392770 UBASH3AP57075 661 aa18.93■□□□□ 0.62
SCN3B-202ENST00000392770 TDRD12Q587J7 1177 aaKnown RBP18.93■□□□□ 0.62
SCN3B-202ENST00000392770 WDR66Q8TBY9 1149 aa18.93■□□□□ 0.62
SCN3B-202ENST00000392770 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.93■□□□□ 0.62
SCN3B-202ENST00000392770 SSH2Q76I76 1423 aa18.93■□□□□ 0.62
SCN3B-202ENST00000392770 ZNF335Q9H4Z2 1342 aaPredicted RBP18.93■□□□□ 0.62
SCN3B-202ENST00000392770 TBCAO75347 108 aaKnown RBP18.93■□□□□ 0.62
SCN3B-202ENST00000392770 TRAF1Q13077 416 aa18.93■□□□□ 0.62
SCN3B-202ENST00000392770 HSP90AA4PQ58FG1 418 aa18.93■□□□□ 0.62
SCN3B-202ENST00000392770 A0A0D9SFI3 127 aa18.92■□□□□ 0.62
SCN3B-202ENST00000392770 JAKMIP3Q5VZ66 844 aa18.92■□□□□ 0.62
SCN3B-202ENST00000392770 URI1O94763 535 aaPredicted RBP18.92■□□□□ 0.62
SCN3B-202ENST00000392770 STXBP4Q6ZWJ1 553 aa18.92■□□□□ 0.62
SCN3B-202ENST00000392770 UBXN4Q92575 508 aa18.92■□□□□ 0.62
SCN3B-202ENST00000392770 VPS36Q86VN1 386 aa18.92■□□□□ 0.62
SCN3B-202ENST00000392770 POTEJP0CG39 1038 aa18.92■□□□□ 0.62
SCN3B-202ENST00000392770 PTH1RQ03431 593 aa18.92■□□□□ 0.62
SCN3B-202ENST00000392770 TCERG1LQ5VWI1 586 aa18.92■□□□□ 0.62
SCN3B-202ENST00000392770 JDP2Q8WYK2 163 aa18.92■□□□□ 0.62
SCN3B-202ENST00000392770 E7EWF7 191 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 CRKLP46109 303 aaKnown RBP18.91■□□□□ 0.62
SCN3B-202ENST00000392770 TNNI2P48788 182 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 SYCP3Q8IZU3 236 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 KIF4BQ2VIQ3 1234 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 ATL3Q6DD88 541 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 HAUS7Q99871 368 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 RIMBP3CA6NJZ7 1639 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 RIMBP3BA6NNM3 1639 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 RIMBP3Q9UFD9 1639 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 N4BP3O15049 544 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 PRDM1O75626 825 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 DEXIO95424 95 aa18.91■□□□□ 0.62
SCN3B-202ENST00000392770 SSR1P43307 286 aaKnown RBP18.91■□□□□ 0.62
SCN3B-202ENST00000392770 ZNF830Q96NB3 372 aaPredicted RBP18.91■□□□□ 0.62
SCN3B-202ENST00000392770 DPP8Q6V1X1 898 aaPredicted RBP18.9■□□□□ 0.62
SCN3B-202ENST00000392770 GOLGA6L10A6NI86 522 aa18.9■□□□□ 0.62
SCN3B-202ENST00000392770 IBSPP21815 317 aaPredicted RBP18.9■□□□□ 0.62
SCN3B-202ENST00000392770 PATL2C9JE40 543 aaKnown RBP18.9■□□□□ 0.62
SCN3B-202ENST00000392770 GNA11P29992 359 aa18.9■□□□□ 0.62
SCN3B-202ENST00000392770 LOC102724428A0A0B4J2F2 783 aa18.9■□□□□ 0.62
SCN3B-202ENST00000392770 SIK1P57059 783 aa18.9■□□□□ 0.62
SCN3B-202ENST00000392770 ASIC1P78348 528 aa18.9■□□□□ 0.62
SCN3B-202ENST00000392770 USO1O60763 962 aaKnown RBP18.89■□□□□ 0.62
SCN3B-202ENST00000392770 FAM193AP78312 1265 aa18.89■□□□□ 0.62
SCN3B-202ENST00000392770 CTAGE1Q96RT6 745 aa18.89■□□□□ 0.62
SCN3B-202ENST00000392770 MYL10Q9BUA6 226 aa18.89■□□□□ 0.62
SCN3B-202ENST00000392770 CPSF1Q10570 1443 aaKnown RBP18.89■□□□□ 0.62
SCN3B-202ENST00000392770 ADGRL3Q9HAR2 1447 aa18.89■□□□□ 0.62
SCN3B-202ENST00000392770 APBA3O96018 575 aa18.89■□□□□ 0.61
SCN3B-202ENST00000392770 SPDYE3A6NKU9 549 aa18.89■□□□□ 0.61
SCN3B-202ENST00000392770 KRI1Q8N9T8 703 aaKnown RBP18.89■□□□□ 0.61
SCN3B-202ENST00000392770 GREM2Q9H772 168 aa18.89■□□□□ 0.61
SCN3B-202ENST00000392770 BRINP3Q76B58 766 aa18.89■□□□□ 0.61
SCN3B-202ENST00000392770 DTNBO60941 627 aa18.88■□□□□ 0.61
SCN3B-202ENST00000392770 EIF3JO75822 258 aaKnown RBP18.88■□□□□ 0.61
SCN3B-202ENST00000392770 ZNF174Q15697 407 aa18.88■□□□□ 0.61
SCN3B-202ENST00000392770 SEC62Q99442 399 aaKnown RBP18.88■□□□□ 0.61
SCN3B-202ENST00000392770 PTCH1Q13635 1447 aa18.88■□□□□ 0.61
SCN3B-202ENST00000392770 H0YIN7 160 aa18.88■□□□□ 0.61
SCN3B-202ENST00000392770 RPS8P62241 208 aaKnown RBP18.88■□□□□ 0.61
SCN3B-202ENST00000392770 GPCPD1Q9NPB8 672 aa18.88■□□□□ 0.61
SCN3B-202ENST00000392770 MAST3O60307 1309 aa18.88■□□□□ 0.61
SCN3B-202ENST00000392770 A0A1B0GVL5 298 aa18.88■□□□□ 0.61
SCN3B-202ENST00000392770 WDHD1O75717 1129 aaPredicted RBP18.88■□□□□ 0.61
SCN3B-202ENST00000392770 TLR7Q9NYK1 1049 aaKnown RBP18.88■□□□□ 0.61
SCN3B-202ENST00000392770 EIF6P56537 245 aaKnown RBP18.87■□□□□ 0.61
SCN3B-202ENST00000392770 SNW1Q13573 536 aaKnown RBP18.87■□□□□ 0.61
SCN3B-202ENST00000392770 ZC3H13Q5T200 1668 aaKnown RBP18.87■□□□□ 0.61
SCN3B-202ENST00000392770 COPRSQ9NQ92 184 aa18.87■□□□□ 0.61
SCN3B-202ENST00000392770 PALD1Q9ULE6 856 aa18.87■□□□□ 0.61
SCN3B-202ENST00000392770 NEXMIFQ5QGS0 1516 aa18.87■□□□□ 0.61
SCN3B-202ENST00000392770 DTHD1Q6ZMT9 781 aa18.87■□□□□ 0.61
SCN3B-202ENST00000392770 PUS3Q9BZE2 481 aaKnown RBP18.87■□□□□ 0.61
SCN3B-202ENST00000392770 TM6SF1Q9BZW5 370 aa18.87■□□□□ 0.61
SCN3B-202ENST00000392770 STAP2Q9UGK3 403 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms