RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 AADACP22760 399 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 MYCNOSP40205 109 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 NDPQ00604 133 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 CFHR3Q02985 330 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 FXYD3Q14802 87 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 ACTBL2Q562R1 376 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 SAMD5Q5TGI4 173 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 ZNF562Q6V9R5 426 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 TMEM17Q86X19 198 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 SNX29P2Q8IUI4 249 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 TCTEX1D1Q8N7M0 179 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 OR5AP2Q8NGF4 316 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 OR5H2Q8NGV7 314 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 DPF1Q92782 380 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 RCC1LQ96I51 464 aaKnown RBP11.95□□□□□ -0.5
SMG6-220ENST00000576218 DUX3Q96PT4 197 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 PHB2Q99623 299 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 HSD17B10Q99714 261 aaKnown RBP11.95□□□□□ -0.5
SMG6-220ENST00000576218 TPSG1Q9NRR2 321 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 ZNF355PQ9NSJ1 428 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 TAS2R8Q9NYW2 309 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 LINC00473A8K010 186 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 CREBL2O60519 120 aaPredicted RBP11.94□□□□□ -0.5
SMG6-220ENST00000576218 HPGDSO60760 199 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 ACTL6BO94805 426 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 DUS4LO95620 317 aaKnown RBP11.94□□□□□ -0.5
SMG6-220ENST00000576218 PPYP01298 95 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 PSMB8P28062 276 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 CDX1P47902 265 aaPredicted RBP11.94□□□□□ -0.5
SMG6-220ENST00000576218 TAS2R46P59540 309 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 CTF1Q16619 201 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 DEFB136Q30KP8 78 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 TMEM177Q53S58 311 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 CLVS1Q8IUQ0 354 aaPredicted RBP11.94□□□□□ -0.5
SMG6-220ENST00000576218 LFNGQ8NES3 379 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 OR4S2Q8NH73 311 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 OSR1Q8TAX0 266 aaPredicted RBP11.94□□□□□ -0.5
SMG6-220ENST00000576218 CMTM3Q96MX0 182 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 GPR61Q9BZJ8 451 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 SLC5A7Q9GZV3 580 aa11.94□□□□□ -0.5
SMG6-220ENST00000576218 CCL24O00175 119 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 MPPED1O15442 326 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 TNFSF12O43508 249 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 WIPF1O43516 503 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 PMP2P02689 132 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 ZNF182P17025 639 aaPredicted RBP11.93□□□□□ -0.5
SMG6-220ENST00000576218 TNXAQ16473 311 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 PYHIN1Q6K0P9 492 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 MRPL41Q8IXM3 137 aaKnown RBP11.93□□□□□ -0.5
SMG6-220ENST00000576218 LINC00482Q8N8I6 264 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 SNAPC3Q92966 411 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 BORCS5Q969J3 196 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 VSIG4Q9Y279 399 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 FBXO7Q9Y3I1 522 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 PLXNB1O43157 2135 aa11.93□□□□□ -0.5
SMG6-220ENST00000576218 RGS5O15539 181 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 IGLV2-23P01705 113 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 ELK1P19419 428 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 PPIFP30405 207 aaKnown RBP11.92□□□□□ -0.5
SMG6-220ENST00000576218 KIR2DS2P43631 304 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 RAB9AP51151 201 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 TPPP2P59282 170 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 UBE2KP61086 200 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 CATR1Q13166 79 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 BEAN1Q3B7T3 259 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 PDLIM3Q53GG5 364 aaPredicted RBP11.92□□□□□ -0.5
SMG6-220ENST00000576218 RNASE12Q5GAN4 147 aaKnown RBP11.92□□□□□ -0.5
SMG6-220ENST00000576218 ZNF66Q6ZN08 573 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 ETV3LQ6ZN32 361 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 IDO2Q6ZQW0 420 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 RNF152Q8N8N0 203 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 OR5M8Q8NGP6 311 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 CASTOR1Q8WTX7 329 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 DDB2Q92466 427 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 RAX2Q96IS3 184 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 MCRIP2Q9BUT9 160 aaKnown RBP11.92□□□□□ -0.5
SMG6-220ENST00000576218 KLK15Q9H2R5 256 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 CCL28Q9NRJ3 127 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 NOTCH3Q9UM47 2321 aa11.92□□□□□ -0.5
SMG6-220ENST00000576218 IGLV1-40P01703 118 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 HLA-DMAP28067 261 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 RFX2P48378 723 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 ALDH3B2P48448 385 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 CRIP2P52943 208 aaPredicted RBP11.91□□□□□ -0.5
SMG6-220ENST00000576218 TSPAN5P62079 268 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 PJVKQ0ZLH3 352 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 AKIRIN2Q53H80 203 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 MFSD4AQ8N468 514 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 TEX45Q8NA69 505 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 POC5Q8NA72 575 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 MINDY2Q8NBR6 621 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 ZBTB34Q8NCN2 500 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 WFDC9Q8NEX5 89 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 RAB2BQ8WUD1 216 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 UBE2E2Q96LR5 201 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 MS4A10Q96PG2 267 aa11.91□□□□□ -0.5
SMG6-220ENST00000576218 ZNF2Q9BSG1 426 aaPredicted RBP11.91□□□□□ -0.5
SMG6-220ENST00000576218 SCPEP1Q9HB40 452 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms