RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 UBE2ZQ9H832 354 aaPredicted RBP2.05□□□□□ -2.08
SPG11-223ENST00000560858 AKIRIN1Q9H9L7 192 aaPredicted RBP2.05□□□□□ -2.08
SPG11-223ENST00000560858 CRLF2Q9HC73 371 aa2.05□□□□□ -2.08
SPG11-223ENST00000560858 LIN7CQ9NUP9 197 aaKnown RBP2.05□□□□□ -2.08
SPG11-223ENST00000560858 P4HTMQ9NXG6 502 aa2.05□□□□□ -2.08
SPG11-223ENST00000560858 IL36RNQ9UBH0 155 aa2.05□□□□□ -2.08
SPG11-223ENST00000560858 OR14J1Q9UGF5 321 aa2.05□□□□□ -2.08
SPG11-223ENST00000560858 CA14Q9ULX7 337 aa2.05□□□□□ -2.08
SPG11-223ENST00000560858 UBE2J1Q9Y385 318 aaPredicted RBP2.05□□□□□ -2.08
SPG11-223ENST00000560858 PUS1Q9Y606 427 aaKnown RBP eCLIP2.05□□□□□ -2.08
SPG11-223ENST00000560858 RFNGQ9Y644 331 aa2.05□□□□□ -2.08
SPG11-223ENST00000560858 LAMA2P24043 3122 aaKnown RBP2.05□□□□□ -2.08
SPG11-223ENST00000560858 TRAV24A0A0B4J272 114 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 KIR2DL5BA0A0G2JN68 375 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 KIR2DL5BA0A0G2JPC4 375 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 CTXND1A0A1B0GTU2 59 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 A0A1B0GV50 99 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 MAP1LC3B2A6NCE7 125 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 PMS2P5A8MQ11 134 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 ZNF727A8MUV8 499 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 B4E171 279 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 G3V3Y1 287 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 TRAPPC2LH3BP13 241 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 J3QT63 122 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 DVL1O14640 695 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 CYB5BO43169 146 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 SYNGR2O43760 224 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 CHST1O43916 411 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 CXCL13O43927 109 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 DNAJC13O75165 2243 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 GGCTO75223 188 aaKnown RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 PGLYRP1O75594 196 aaPredicted RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 DYSFO75923 2080 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 CST7O76096 145 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 KBTBD11O94819 623 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 YIF1AO95070 293 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 HRASP01112 189 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 IFNA1P01562 189 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 IFNA5P01569 189 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 IGKV1D-33P01593 117 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 IGKV1-33P01594 117 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 IGKV1-5P01602 117 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 AMBPP02760 352 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 TRGC2P03986 189 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 P04436 131 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 TYMSP04818 313 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 PFN1P07737 140 aaKnown RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 SCTP09683 121 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 RFPL3SP0C7P2 107 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 TRGC1P0CF51 173 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 PSG2P11465 335 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 TDGF1P13385 188 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 MDKP21741 143 aaPredicted RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 OMGP23515 440 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 S100GP29377 79 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 GPX4P36969 197 aaPredicted RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 TSPAN7P41732 249 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 HAAOP46952 286 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 ASCL1P50553 236 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 NDUFA6P56556 154 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 CLDN18P56856 261 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 CARD18P57730 90 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 SSTP61278 116 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 PKIAP61925 76 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 HBG1P69891 147 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 HBG2P69892 147 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 SLC38A11Q08AI6 406 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 ARL16Q0P5N6 197 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 TMEM267Q0VDI3 215 aaPredicted RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 EIF4EBP1Q13541 118 aaPredicted RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 GAMTQ14353 236 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 JOSD1Q15040 202 aaPredicted RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 ZNF674Q2M3X9 581 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 VWC2Q2TAL6 325 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 LRRC75BQ2VPJ9 315 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 TMEM249Q2WGJ8 235 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 ANXA2RQ3ZCQ2 193 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 AARDQ4LEZ3 155 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 LBHQ53QV2 105 aaPredicted RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 DOCK11Q5JSL3 2073 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 C9orf152Q5JTZ5 239 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 LYSMD4Q5XG99 296 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 Q6P435 159 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 TMEM14EPQ6UXP3 125 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 ZNF497Q6ZNH5 498 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 MRPL21Q7Z2W9 205 aaKnown RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 RAI1Q7Z5J4 1906 aaPredicted RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 RPS19BP1Q86WX3 136 aaKnown RBP2.04□□□□□ -2.08
SPG11-223ENST00000560858 TMEM183AQ8IXX5 376 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 MKXQ8IYA7 352 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 Q8IYB0 196 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 KIR2DL5AQ8N109 375 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 TCTEX1D1Q8N7M0 179 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 ZNF383Q8NA42 475 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 OR10V1Q8NGI7 309 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 OR5A2Q8NGI9 324 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 OR10D4PQ8NGN7 298 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 ABHD5Q8WTS1 349 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 ABHD3Q8WU67 409 aa2.04□□□□□ -2.08
SPG11-223ENST00000560858 TMEM170AQ8WVE7 144 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms