RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ZNF133P52736 654 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 EMP1P54849 157 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIST1H2BDP58876 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TPPP2P59282 170 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TAS2R19P59542 299 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 PFN3P60673 137 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 RPS15AP62244 130 aaKnown RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 RPS4XP62701 263 aaKnown RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIST1H2BCP62807 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ARG2P78540 354 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CRADDP78560 199 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 EWSR1Q01844 656 aaKnown RBP eCLIP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SMAGPQ0VAQ4 97 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 MELKQ14680 651 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 PAFAH1B3Q15102 231 aaKnown RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SIX1Q15475 284 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIST2H2BEQ16778 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR10J3Q5JRS4 329 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 LY6G6FQ5SQ64 297 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 C1orf220Q5T0J3 134 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 C1orf195Q5TG92 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF660Q6AZW8 331 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HBMQ6B0K9 141 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR10K2Q6IF99 312 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 UFSP1Q6NVU6 142 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM207Q6UWW9 146 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 AMTNQ6UX39 209 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 C12orf54Q6X4T0 127 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ADAMTSL5Q6ZMM2 481 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF841Q6ZN19 808 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF705AQ6ZN79 300 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC25A48Q6ZT89 311 aaKnown RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 GOLT1AQ6ZVE7 132 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 COMMD6Q7Z4G1 85 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 FAM19A1Q7Z5A9 133 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CEACAM19Q7Z692 300 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CMC1Q7Z7K0 106 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC25A42Q86VD7 318 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TGIF2LYQ8IUE0 185 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 FBXO16Q8IX29 292 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR4N5Q8IXE1 308 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CMTM1Q8IZ96 169 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 MUC15Q8N387 334 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 RNF175Q8N4F7 328 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM86BQ8N661 226 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 DEFB125Q8N687 156 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TCEANCQ8N8B7 351 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 COX18Q8N8Q8 333 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 RELL2Q8NC24 303 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 LINC00301Q8NCQ3 95 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF555Q8NEP9 628 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 NFAM1Q8NET5 270 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR2M3Q8NG83 312 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR11G2Q8NGC1 345 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR11H4Q8NGC9 324 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR52R1Q8NGF1 315 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR5D16Q8NGK9 328 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR10G7Q8NGN6 311 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR4C13Q8NGP0 309 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR1L3Q8NH93 324 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 C8orf46Q8TAG6 207 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 PLPPR1Q8TBJ4 325 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 RDH11Q8TC12 318 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 PIFOQ8TCI5 191 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC37A2Q8TED4 501 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SAP25Q8TEE9 199 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR5P2Q8WZ92 322 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIST1H2BHQ93079 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 NEIL2Q969S2 332 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 PPCDCQ96CD2 204 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 LRRC58Q96CX6 371 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLAMF6Q96DU3 332 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 PCED1BQ96HM7 432 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 NRTNQ99748 197 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 NKX3-1Q99801 234 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIST1H2BNQ99877 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIST1H2BMQ99879 126 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 DERL1Q9BUN8 251 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 VAMP8Q9BV40 100 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 WDR61Q9GZS3 305 aaKnown RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CHST6Q9GZX3 395 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM191AQ9H0A3 160 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 POLR2J3Q9H1A7 115 aaKnown RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR2D2Q9H210 308 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 PPDPFQ9H3Y8 114 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TBC1D17Q9HA65 648 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 HES4Q9HCC6 221 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ACP6Q9NPH0 428 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 MEPEQ9NQ76 525 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 PRTFDC1Q9NRG1 225 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM100Q9NV29 134 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 C1orf123Q9NWV4 160 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 SIGLEC8Q9NYZ4 499 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 GALPQ9UBC7 116 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 CACFD1Q9UGQ2 172 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 RABAC1Q9UI14 185 aa1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 TRMT112Q9UI30 125 aaKnown RBP1.57□□□□□ -2.16
HMGB3P17-201ENST00000504195 ANXA10Q9UJ72 324 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms